RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 NCF1P14598 390 aaPredicted RBP16.51■□□□□ 0.23
SAMM50-201ENST00000350028 GPX3P22352 226 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 STK19P49842 368 aaPredicted RBP16.51■□□□□ 0.23
SAMM50-201ENST00000350028 ERFP50548 548 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 FOXA1P55317 472 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 PSME3P61289 254 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 FPGSQ05932 587 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 LRP8Q14114 963 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 CHRNA6Q15825 494 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 HACD2Q6Y1H2 254 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 USP45Q70EL2 814 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 KBTBD6Q86V97 674 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 ZSWIM9Q86XI8 627 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 POF1BQ8WVV4 589 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 PYDC1Q8WXC3 89 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 N4BP2L2Q92802 583 aaPredicted RBP16.51■□□□□ 0.23
SAMM50-201ENST00000350028 TCEAL4Q96EI5 215 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 ABHD8Q96I13 439 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 ZNF641Q96N77 438 aaPredicted RBP16.51■□□□□ 0.23
SAMM50-201ENST00000350028 CIPCQ9C0C6 399 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 TDP1Q9NUW8 608 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 CCDC167Q9P0B6 97 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 TBC1D14Q9P2M4 693 aa16.51■□□□□ 0.23
SAMM50-201ENST00000350028 TNPO3Q9Y5L0 923 aaKnown RBP16.51■□□□□ 0.23
SAMM50-201ENST00000350028 GIPC1O14908 333 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 CHEK2O96017 543 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 S100BP04271 92 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-201ENST00000350028 ALDOCP09972 364 aaKnown RBP16.5■□□□□ 0.23
SAMM50-201ENST00000350028 PABPC1P11940 636 aaKnown RBP16.5■□□□□ 0.23
SAMM50-201ENST00000350028 ARSAP15289 507 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 DGKAP23743 735 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 HOXA9P31269 272 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 PSMD8P48556 350 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 AGTR2P50052 363 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 THOP1P52888 689 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 PKNOX1P55347 436 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 CEACAM7Q14002 265 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 TGFBIQ15582 683 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 REP15Q6BDI9 236 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 CRTC1Q6UUV9 634 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 MACC1Q6ZN28 852 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 FRA10AC1Q70Z53 315 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 SPATA19Q7Z5L4 167 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 DHDDSQ86SQ9 333 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 PHYKPLQ8IUZ5 450 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 SPPL3Q8TCT6 385 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 IRF7Q92985 503 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 KCNA7Q96RP8 456 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 HTATIP2Q9BUP3 242 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 BBS2Q9BXC9 721 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 TUBB1Q9H4B7 451 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 FBRSL1Q9HCM7 1045 aaKnown RBP16.5■□□□□ 0.23
SAMM50-201ENST00000350028 RANBP2P49792 3224 aaKnown RBP16.5■□□□□ 0.23
SAMM50-201ENST00000350028 AGAP14A8MT82 685 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 BBIP1A8MTZ0 92 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 TRIM38O00635 465 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 FBP2O00757 339 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 NRP2O60462 931 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 RHOP08100 348 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 UGT1A6P19224 532 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 UGT1A1P22309 533 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 UGT1A4P22310 534 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 UGT1A3P35503 534 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 UGT1A5P35504 534 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 UBE3AQ05086 875 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 PCBP2Q15366 365 aaKnown RBP eCLIP16.5■□□□□ 0.23
SAMM50-201ENST00000350028 CRY1Q16526 586 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 RBBP7Q16576 425 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 GSTA3Q16772 222 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 TMEM240Q5SV17 173 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 ASTLQ6HA08 431 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-201ENST00000350028 SYVN1Q86TM6 617 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 PLPP6Q8IY26 295 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 MYO1HQ8N1T3 1032 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 NXPE1Q8N323 547 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 VOPP1Q96AW1 172 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 TUBGCP3Q96CW5 907 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 MCCC1Q96RQ3 725 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-201ENST00000350028 CCT7Q99832 543 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 BOCQ9BWV1 1114 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 TLR9Q9NR96 1032 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 SPHK2Q9NRA0 654 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 CACNA2D2Q9NY47 1150 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 CXXC1Q9P0U4 656 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-201ENST00000350028 PRKAG2Q9UGJ0 569 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 RWDD3Q9Y3V2 267 aa16.5■□□□□ 0.23
SAMM50-201ENST00000350028 NPIPB15A6NHN6 443 aaPredicted RBP16.49■□□□□ 0.23
SAMM50-201ENST00000350028 NEDD8-MDP1E9PL57 170 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 E2F3O00716 465 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 MRASO14807 208 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 RAD51BO15315 384 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 TLL1O43897 1013 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 SLC25A14O95258 325 aaPredicted RBP16.49■□□□□ 0.23
SAMM50-201ENST00000350028 HNRNPA1P09651 372 aaKnown RBP eCLIP16.49■□□□□ 0.23
SAMM50-201ENST00000350028 LINC00032P0C843 101 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 CA5AP35218 305 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 DPP6P42658 865 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 CCNHP51946 323 aaPredicted RBP16.49■□□□□ 0.23
SAMM50-201ENST00000350028 CLNS1AP54105 237 aaKnown RBP16.49■□□□□ 0.23
SAMM50-201ENST00000350028 ECT2LQ008S8 904 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms