RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 IFT88Q13099 833 aa18.46■□□□□ 0.55
PTN-201ENST00000348225 CRY1Q16526 586 aa18.46■□□□□ 0.55
PTN-201ENST00000348225 TTLL9Q3SXZ7 439 aa18.46■□□□□ 0.55
PTN-201ENST00000348225 ZNF776Q68DI1 518 aaPredicted RBP18.46■□□□□ 0.55
PTN-201ENST00000348225 PIWIL4Q7Z3Z4 852 aaKnown RBP18.46■□□□□ 0.55
PTN-201ENST00000348225 WDR75Q8IWA0 830 aaKnown RBP18.46■□□□□ 0.55
PTN-201ENST00000348225 CPNE9Q8IYJ1 553 aa18.46■□□□□ 0.55
PTN-201ENST00000348225 TXNDC5Q8NBS9 432 aaKnown RBP18.46■□□□□ 0.55
PTN-201ENST00000348225 CCDC97Q96F63 343 aaPredicted RBP18.46■□□□□ 0.55
PTN-201ENST00000348225 MSANTD3Q96H12 275 aa18.46■□□□□ 0.55
PTN-201ENST00000348225 SLC30A3Q99726 388 aa18.46■□□□□ 0.55
PTN-201ENST00000348225 GABRG3Q99928 467 aa18.46■□□□□ 0.55
PTN-201ENST00000348225 C20orf27Q9GZN8 174 aa18.46■□□□□ 0.55
PTN-201ENST00000348225 ZNF395Q9H8N7 513 aaPredicted RBP18.46■□□□□ 0.55
PTN-201ENST00000348225 SPATS2LQ9NUQ6 558 aaKnown RBP18.46■□□□□ 0.55
PTN-201ENST00000348225 NCKIPSDQ9NZQ3 722 aa18.46■□□□□ 0.55
PTN-201ENST00000348225 SYCE1LA8MT33 242 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 A8MT66 165 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 PLK4O00444 970 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 LZTS3O60299 673 aaPredicted RBP18.45■□□□□ 0.54
PTN-201ENST00000348225 KERAO60938 352 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 KIAA0754O94854 1291 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 TRIM16O95361 564 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 EGFP01133 1207 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 C6P13671 934 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 ARFIP2P53365 341 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 NAGLUP54802 743 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 NFKB2Q00653 900 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 RCN2Q14257 317 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 C2orf27AQ580R0 203 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 CFAP157Q5JU67 520 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 LDLRAP1Q5SW96 308 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 NAPRTQ6XQN6 538 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 SPNS2Q8IVW8 549 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 DDHD1Q8NEL9 900 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 OR2T3Q8NH03 318 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 PIWIL2Q8TC59 973 aaKnown RBP18.45■□□□□ 0.54
PTN-201ENST00000348225 NUS1Q96E22 293 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 PDLIM5Q96HC4 596 aaKnown RBP18.45■□□□□ 0.54
PTN-201ENST00000348225 DRC3Q9H069 523 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 KLHL42Q9P2K6 505 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 DCTN4Q9UJW0 460 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 RNF112Q9ULX5 631 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 FADS3Q9Y5Q0 445 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 ATXN2Q99700 1313 aaKnown RBP18.45■□□□□ 0.54
PTN-201ENST00000348225 BTN3A1O00481 513 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 MID1O15344 667 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 AP1G1O43747 822 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 NPHS1O60500 1241 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 TSPAN12O95859 305 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 ATP1B2P14415 290 aaPredicted RBP18.45■□□□□ 0.54
PTN-201ENST00000348225 GM2AP17900 193 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 MSH3P20585 1137 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 DGKAP23743 735 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 B4GALNT1Q00973 533 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 CREB5Q02930 508 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 OR4D1Q15615 310 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 PIP5KL1Q5T9C9 394 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 RAB44Q7Z6P3 723 aaPredicted RBP18.45■□□□□ 0.54
PTN-201ENST00000348225 ZBTB2Q8N680 514 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 RFWD2Q8NHY2 731 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 EEF1AKMT1Q8WVE0 214 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 BTN2A2Q8WVV5 523 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 HLA-CQ95604 372 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 ERLEC1Q96DZ1 483 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 SORT1Q99523 831 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 TMPRSS11EQ9UL52 423 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 TMCO1Q9UM00 188 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 DNAJC16Q9Y2G8 782 aa18.45■□□□□ 0.54
PTN-201ENST00000348225 A0A0G2JND7 137 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 FADS2P1A8MWK0 482 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 QSOX1O00391 747 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 DCTN3O75935 186 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 RECQL5O94762 991 aaPredicted RBP18.44■□□□□ 0.54
PTN-201ENST00000348225 AP2A2O94973 939 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 ITGB6P18564 788 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 DRD3P35462 400 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 HNRNPH2P55795 449 aaKnown RBP18.44■□□□□ 0.54
PTN-201ENST00000348225 MRPS21P82921 87 aaKnown RBP18.44■□□□□ 0.54
PTN-201ENST00000348225 TRPM8Q7Z2W7 1104 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 YTHDF3Q7Z739 585 aaKnown RBP18.44■□□□□ 0.54
PTN-201ENST00000348225 CCNYL1Q8N7R7 359 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 LKAAEAR1Q8TD35 194 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 GLYATL1Q969I3 302 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 ATOH8Q96SQ7 321 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 CYP4F12Q9HCS2 524 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 LATS2Q9NRM7 1088 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 KCTD5Q9NXV2 234 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 KCNK4Q9NYG8 393 aa18.44■□□□□ 0.54
PTN-201ENST00000348225 MARCOQ9UEW3 520 aaPredicted RBP18.44■□□□□ 0.54
PTN-201ENST00000348225 LRRK1Q38SD2 2015 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 NPEPPSL1A6NEC2 478 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 NEMP2A6NFY4 417 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 CCT8L1PA6NM43 557 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 TSPAN6O43657 245 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 MMP20O60882 483 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 CBSLP0DN79 551 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 KITP10721 976 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 HOXB2P14652 356 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 CBSP35520 551 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms