RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 GALPQ9UBC7 116 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 MUC6Q6W4X9 2439 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 MEI4A8MW99 385 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 NIPSNAP2O75323 286 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 FUCA1P04066 466 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 SNRPAP09012 282 aaKnown RBP18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 PKMP14618 531 aaKnown RBP18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 ZNF8P17098 575 aaPredicted RBP18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 MSH3P20585 1137 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 RPS3P23396 243 aaKnown RBP eCLIP18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 NSG1P42857 185 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 TAS2R39P59534 338 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 ABI3BPQ7Z7G0 1075 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 CMC1Q7Z7K0 106 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 KRT222Q8N1A0 295 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 RIBC1Q8N443 379 aaPredicted RBP18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 FAM136AQ96C01 138 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 ELMO2Q96JJ3 720 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 TTC1Q99614 292 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 CENPHQ9H3R5 247 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 CAAP1Q9H8G2 361 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 TRIM39Q9HCM9 518 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 PHPT1Q9NRX4 125 aaPredicted RBP18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 SLC39A10Q9ULF5 831 aa18.77■□□□□ 0.6
CHMP4A-201ENST00000347519 TMEM202A6NGA9 273 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 ATP8B1O43520 1251 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 SYF2O95926 243 aaKnown RBP18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 WNT1P04628 370 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 MYCLP1P12525 358 aaPredicted RBP18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 ATP1B2P14415 290 aaPredicted RBP18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 ITGB6P18564 788 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 SAT1P21673 171 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 NUDT1P36639 197 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 PPARGP37231 505 aaPredicted RBP18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 ADARP55265 1226 aaKnown RBP18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 ZNF460Q14592 562 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 ZNF528Q3MIS6 628 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 TNFAIP8L3Q5GJ75 292 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 LAYNQ6UX15 382 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 KYAT3Q6YP21 454 aaKnown RBP18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 MACC1Q6ZN28 852 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 PIM3Q86V86 326 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 CEP97Q8IW35 865 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 BEND7Q8N7W2 519 aaPredicted RBP18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 OR13H1Q8NG92 308 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 C1orf216Q8TAB5 229 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 DCUN1D1Q96GG9 259 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 SLC30A3Q99726 388 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 CLPBQ9H078 707 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 VPS9D1Q9Y2B5 631 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 GON4LQ3T8J9 2241 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 LRP4O75096 1905 aa18.76■□□□□ 0.59
CHMP4A-201ENST00000347519 ZNF318Q5VUA4 2279 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 IQANK1A0A1B0GTG1 560 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 A0A1W2PR77 199 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 OR2AG2A6NM03 316 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 PFDN6O15212 129 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 RGS16O15492 202 aaPredicted RBP18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 LILRB5O75023 590 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 RFPL1O75677 317 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 KRT38O76015 456 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 ASMTLO95671 621 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 ESR1P03372 595 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 ALDOAP04075 364 aaKnown RBP18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 HOXC4P09017 264 aaPredicted RBP18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 MYZAPP0CAP1 466 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 PLK5Q496M5 336 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 TTMPQ5BVD1 217 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 PMS2CLQ68D20 193 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 Q6ZSR6 202 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 LPCAT2Q7L5N7 544 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 SLC22A18ASQ8N1D0 253 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 ZBTB44Q8NCP5 570 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 DNASE2BQ8WZ79 361 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 FAM126AQ9BYI3 521 aaPredicted RBP18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 MIR1-1HGQ9H1L0 117 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 ZSCAN32Q9NX65 697 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 PNMA8BQ9ULN7 279 aaPredicted RBP18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 VWA7Q9Y334 891 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 PRKAB1Q9Y478 270 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 PCDHB1Q9Y5F3 818 aa18.75■□□□□ 0.59
CHMP4A-201ENST00000347519 SPAG17Q6Q759 2223 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 TPP1O14773 563 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 GALR2O43603 387 aaPredicted RBP18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 KRT37O76014 449 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 RHOBTB1O94844 696 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 CDK14O94921 469 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 CEACAM5P06731 702 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 CREB1P16220 341 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 FDXRP22570 491 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 CNTFP26441 200 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 MAGEA12P43365 314 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 CSRP3P50461 194 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 KIAA1024LP59773 190 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 USP10Q14694 798 aaKnown RBP18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 NFATC4Q14934 902 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 PPM1JQ5JR12 505 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 PTRHD1Q6GMV3 140 aaKnown RBP18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 FAM45BPQ6NSW5 357 aa18.74■□□□□ 0.59
CHMP4A-201ENST00000347519 TMEM220Q6QAJ8 160 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms