RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SLC4A9Q96Q91 983 aa17.93■□□□□ 0.46
SMC4-201ENST00000344722 MRPL45Q9BRJ2 306 aaKnown RBP17.93■□□□□ 0.46
SMC4-201ENST00000344722 TOR3AQ9H497 397 aa17.93■□□□□ 0.46
SMC4-201ENST00000344722 WTIPA6NIX2 430 aaPredicted RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 CHRM1P11229 460 aaPredicted RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 GMPSP49915 693 aaPredicted RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 ALDH3A2P51648 485 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 SYCE2Q6PIF2 218 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 GLB1L3Q8NCI6 653 aaPredicted RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 TMBIM1Q969X1 311 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 PTCH2Q9Y6C5 1203 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 H3BNH8 94 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 NR2F1P10589 423 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 CES1P23141 567 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 THPOP40225 353 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 HSPA14Q0VDF9 509 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 MYBPC3Q14896 1274 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 RAB39AQ14964 217 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 OOSP2Q86WS3 158 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 BSNDQ8WZ55 320 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 AURKBQ96GD4 344 aaPredicted RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 TSSK3Q96PN8 268 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 M0R2N6 131 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 SNX4O95219 450 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 CYP2A6P11509 494 aaPredicted RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 PSKH1P11801 424 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 HPGDP15428 266 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 CCNCP24863 283 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 ZNF404Q494X3 552 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 MIPEPQ99797 713 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 CPNE3O75131 537 aaKnown RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 UGT2B17O75795 530 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 ZNF182P17025 639 aaPredicted RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 GLUD2P49448 558 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 OGFRL1Q5TC84 451 aaPredicted RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 DET1Q7L5Y6 550 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 SLC39A8Q9C0K1 460 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 TRIT1Q9H3H1 467 aaKnown RBP17.92■□□□□ 0.46
SMC4-201ENST00000344722 BPIFA1Q9NP55 256 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 ZNF358Q9NW07 568 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 FAM198AQ9UFP1 575 aa17.92■□□□□ 0.46
SMC4-201ENST00000344722 BMP7P18075 431 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 MC4RP32245 332 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 MXD1Q05195 221 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 GPR162Q16538 588 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 HID1Q8IV36 788 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 CCDC28AQ8IWP9 274 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 FAM20CQ8IXL6 584 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 ZUFSPQ96AP4 578 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 SNTG1Q9NSN8 517 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 MSS51Q4VC12 460 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 FAM35AQ86V20 835 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 PAK6Q9NQU5 681 aaPredicted RBP17.91■□□□□ 0.46
SMC4-201ENST00000344722 MARCH2Q9P0N8 246 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 DERAQ9Y315 318 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 PKMP14618 531 aaKnown RBP17.91■□□□□ 0.46
SMC4-201ENST00000344722 PRKCHP24723 683 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 GNG2P59768 71 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 GNASQ5JWF2 1037 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 PEG10Q86TG7 708 aaKnown RBP17.91■□□□□ 0.46
SMC4-201ENST00000344722 ZNF655Q8N720 491 aaPredicted RBP17.91■□□□□ 0.46
SMC4-201ENST00000344722 SLC13A3Q8WWT9 602 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 TSPAN18Q96SJ8 248 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 APOBEC3GQ9HC16 384 aaKnown RBP17.91■□□□□ 0.46
SMC4-201ENST00000344722 SPATA31C2B4DYI2 1134 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 DNAJB5O75953 348 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 TRBC1P01850 177 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 DNAJB1P25685 340 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 STT3AP46977 705 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 AP3S2P59780 193 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 SLC9A5Q14940 896 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 TSC22D1Q15714 1073 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 RAP1GAP2Q684P5 730 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 USP45Q70EL2 814 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 ASCC1Q8N9N2 400 aaKnown RBP17.91■□□□□ 0.46
SMC4-201ENST00000344722 TFAP2BQ92481 460 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 FBXL20Q96IG2 436 aa17.91■□□□□ 0.46
SMC4-201ENST00000344722 CNOT11Q9UKZ1 510 aaKnown RBP17.91■□□□□ 0.46
SMC4-201ENST00000344722 MOXD2PA6NHM9 499 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 RSL1D1O76021 490 aaKnown RBP17.9■□□□□ 0.46
SMC4-201ENST00000344722 RPN2P04844 631 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 IMPDH1P20839 514 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 OMPP47874 163 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 RBFAQ8N0V3 343 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 MRPS31Q92665 395 aaKnown RBP17.9■□□□□ 0.46
SMC4-201ENST00000344722 ABCG8Q9H221 673 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 AURKAO14965 403 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 SERPINA4P29622 427 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 MTPNP58546 118 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 ZNF460Q14592 562 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 TRNT1Q96Q11 434 aaKnown RBP17.9■□□□□ 0.46
SMC4-201ENST00000344722 GAD1Q99259 594 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 ST14Q9Y5Y6 855 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 XKRXQ6PP77 449 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 SAMD7Q7Z3H4 446 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 DNAJB3Q8WWF6 145 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 TXLNGYQ9BZA5 131 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 MLXQ9UH92 298 aa17.9■□□□□ 0.46
SMC4-201ENST00000344722 SPEF2Q9C093 1822 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms