RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OR51D1Q8NGF3 324 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 P2RX5Q93086 422 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CRELD1Q96HD1 420 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM80Q96HE8 168 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GMLQ99445 158 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 WRAP53Q9BUR4 548 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NLE1Q9NVX2 485 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CFAP74Q9C0B2 1584 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DISP3Q9P2K9 1392 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SUPT20HL2P0C7V6 817 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SOAT1P35610 550 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 FBXO39Q8N4B4 442 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLC16A10Q8TF71 515 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 TSNAXQ99598 290 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 RAD9AQ99638 391 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NT5C1AQ9BXI3 368 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KIF25Q9UIL4 384 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 RPS6KA6Q9UK32 745 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ATXN1P54253 815 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ASTE1Q2TB18 679 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 OLFML2AQ68BL7 652 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DUPD1Q68J44 220 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 UBE2R2Q712K3 238 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 OR4D10Q8NGI6 311 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CPA5Q8WXQ8 436 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 COPS5Q92905 334 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NT5C1BQ96P26 610 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CKLFQ9UBR5 152 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PLA2G4CQ9UP65 541 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHAC2Q9Y5I4 1007 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DNTTP04053 509 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 TEKQ02763 1124 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SRSF11Q05519 484 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZBTB37Q5TC79 503 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ANKS3Q6ZW76 656 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 OAFQ86UD1 273 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 VAT1LQ9HCJ6 419 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 IFT46Q9NQC8 304 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PAPSS1O43252 624 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MC3RP41968 323 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SCARB2Q14108 478 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DACT2Q5SW24 774 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 BBS12Q6ZW61 710 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 RAB42Q8N4Z0 105 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DCAKDQ8WVC6 231 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SYT4Q9H2B2 425 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KCTD3Q9Y597 815 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 BCLAF3A2AJT9 711 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 IMPA2O14732 288 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SULT1A2P50226 295 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NFX1Q12986 1120 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MINDY4Q4G0A6 757 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 COQ5Q5HYK3 327 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GSTCDQ8NEC7 633 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SCMH1Q96GD3 660 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KIAA1683Q9H0B3 1180 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KCNJ14Q9UNX9 436 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CLTCL1P53675 1640 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 A0A075B6Q4 140 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KIAA0391O15091 583 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KDM4BO94953 1096 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 RLN2P04090 185 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CYP4B1P13584 511 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MATN1P21941 496 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PTK6Q13882 451 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KHDC1Q4VXA5 237 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 FAM71F1Q96KD3 344 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF512BQ96KM6 892 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 COMMD4Q9H0A8 199 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF358Q9NW07 568 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 HEY2Q9UBP5 337 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 LRWD1Q9UFC0 647 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 AP2A2O94973 939 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PSKH1P11801 424 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GRAPQ13588 217 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF605Q86T29 641 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 TSTD1Q8NFU3 115 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 OR4Q3Q8NH05 313 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MOAP1Q96BY2 351 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLC38A2Q96QD8 506 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ALPK1Q96QP1 1244 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KCNJ15Q99712 375 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MTFR1LQ9H019 292 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 FAM124BQ9H5Z6 455 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PAK1IP1Q9NWT1 392 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 RUSC2Q8N2Y8 1516 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 LOC102724428A0A0B4J2F2 783 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF197O14709 1029 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GLI1P08151 1106 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NR2C2P49116 596 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SIK1P57059 783 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PDE12Q6L8Q7 609 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 C6orf120Q7Z4R8 191 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GPR142Q7Z601 462 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 RNF31Q96EP0 1072 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 C7orf25Q9BPX7 421 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 UCK2Q9BZX2 261 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CCDC86Q9H6F5 360 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PADI2Q9Y2J8 665 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CPQQ9Y646 472 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms