RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ABCC13Q9NSE7 274 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 C1orf109Q9NX04 203 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 MT-CO2P00403 227 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 ACADVLP49748 655 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 CAPZA1P52907 286 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 MERTKQ12866 999 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 MAB21L1Q13394 359 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 DUS1LQ6P1R4 473 aaKnown RBP17.5■□□□□ 0.39
SMAD4-201ENST00000342988 LAS2Q8IYD9 372 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 COQ8AQ8NI60 647 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF347Q96SE7 839 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 PPP1R14DQ9NXH3 145 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 CABYRO75952 493 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 KCNA6P17658 529 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 BAATQ14032 418 aaPredicted RBP17.5■□□□□ 0.39
SMAD4-201ENST00000342988 C17orf64Q86WR6 236 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 CEP295NLQ96MC4 621 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 JSRP1Q96MG2 331 aaPredicted RBP17.5■□□□□ 0.39
SMAD4-201ENST00000342988 EQTNQ9NQ60 294 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 CCDC163A0A0D9SF12 145 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 VARSP26640 1264 aaKnown RBP17.5■□□□□ 0.39
SMAD4-201ENST00000342988 GRIA2P42262 883 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF155Q12901 538 aaPredicted RBP17.5■□□□□ 0.39
SMAD4-201ENST00000342988 TMC3Q7Z5M5 1100 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 TBC1D10CQ8IV04 446 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 RAB2BQ8WUD1 216 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 CENPBD1B2RD01 187 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 H0YGN5 161 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 PAQR7Q86WK9 346 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.5■□□□□ 0.396e-6■□□□□ 8.3
SMAD4-201ENST00000342988 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.5■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF726A6NNF4 738 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 NKRFO15226 690 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMAD4-201ENST00000342988 NFE2L1Q14494 772 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 Q8N402 240 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 ATG13O75143 517 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 HTR2AP28223 471 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 GTF2A2P52657 109 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 TEAD4Q15561 434 aa17.5■□□□□ 0.39
SMAD4-201ENST00000342988 PDP1Q9P0J1 537 aaPredicted RBP17.5■□□□□ 0.39
SMAD4-201ENST00000342988 STMND1H3BQB6 276 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 PROSCO94903 275 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 MAN2A2P49641 1150 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 FGL1Q08830 312 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 TAS2R3Q9NYW6 316 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 TRAF6Q9Y4K3 522 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 AP1M2Q9Y6Q5 423 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 I3L521 148 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SSR2P43308 183 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 ATP6V0D1P61421 351 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SF1Q15637 639 aaKnown RBP17.49■□□□□ 0.39
SMAD4-201ENST00000342988 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 UCKL1Q9NWZ5 548 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SEC14L4Q9UDX3 406 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 M0QX08 132 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 ERAL1O75616 437 aaKnown RBP17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SCAF4O95104 1147 aaKnown RBP17.49■□□□□ 0.39
SMAD4-201ENST00000342988 TDGQ13569 410 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SEC23AQ15436 765 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 ABHD5Q8WTS1 349 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SCP2D1Q9UJQ7 156 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SNCAIPQ9Y6H5 919 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 FAM83HQ6ZRV2 1179 aaPredicted RBP17.49■□□□□ 0.39
SMAD4-201ENST00000342988 KCTD15Q96SI1 283 aaPredicted RBP17.49■□□□□ 0.39
SMAD4-201ENST00000342988 PBDC1Q9BVG4 233 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 CFL2Q9Y281 166 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 FFAR3O14843 346 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 GPR42O15529 346 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 RIDAP52758 137 aaKnown RBP17.49■□□□□ 0.39
SMAD4-201ENST00000342988 NAE1Q13564 534 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 COL28A1Q2UY09 1125 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SCGB2B2Q4G0G5 96 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 CCNYL2Q5T2Q4 361 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 LGI2Q8N0V4 545 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 ATP6V1C2Q8NEY4 427 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 MAB21L2Q9Y586 359 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 ISM1B1AKI9 464 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF543Q08ER8 600 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 BMPR2Q13873 1038 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 MTFR2Q6P444 385 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 GRIN3AQ8TCU5 1115 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 MINPP1Q9UNW1 487 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 AP4B1Q9Y6B7 739 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SNCGO76070 127 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 ITGA7Q13683 1181 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 EGFLAMQ63HQ2 1017 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 YTHDF3Q7Z739 585 aaKnown RBP17.49■□□□□ 0.39
SMAD4-201ENST00000342988 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMAD4-201ENST00000342988 TAMM41Q96BW9 452 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 WDR37Q9Y2I8 494 aa17.49■□□□□ 0.39
SMAD4-201ENST00000342988 FBP2O00757 339 aa17.48■□□□□ 0.39
SMAD4-201ENST00000342988 PSTKQ8IV42 348 aaKnown RBP17.48■□□□□ 0.39
SMAD4-201ENST00000342988 SLC41A1Q8IVJ1 513 aa17.48■□□□□ 0.39
SMAD4-201ENST00000342988 CPNE9Q8IYJ1 553 aa17.48■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF578Q96N58 590 aaPredicted RBP17.48■□□□□ 0.39
SMAD4-201ENST00000342988 POLR3BQ9NW08 1133 aaPredicted RBP17.48■□□□□ 0.39
SMAD4-201ENST00000342988 NOP16Q9Y3C1 178 aaKnown RBP17.48■□□□□ 0.39
SMAD4-201ENST00000342988 LOC100509620A0A075B734 347 aa17.48■□□□□ 0.39
SMAD4-201ENST00000342988 TRAFD1O14545 582 aaPredicted RBP17.48■□□□□ 0.39
SMAD4-201ENST00000342988 PDPK1O15530 556 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms