RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 DMRTB1Q96MA1 342 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 PSKH2Q96QS6 385 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 TRAPPC4Q9Y296 219 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 EEF2KO00418 725 aaKnown RBP18.37■□□□□ 0.53
SMPD1-201ENST00000342245 CTDSP2O14595 271 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 ENPP3O14638 875 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 RGS10O43665 173 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 ZNF780AO75290 641 aaPredicted RBP18.37■□□□□ 0.53
SMPD1-201ENST00000342245 VPS4BO75351 444 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 EGFRP00533 1210 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 PGK1P00558 417 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 CYP11A1P05108 521 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 HOXB6P17509 224 aaKnown RBP18.37■□□□□ 0.53
SMPD1-201ENST00000342245 PIGAP37287 484 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 IL12RB1P42701 662 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 GTF2A2P52657 109 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 ACAP2Q15057 778 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 UTS2BQ765I0 119 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 ITFG1Q8TB96 612 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 ACOT13Q9NPJ3 140 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 VPS4AQ9UN37 437 aa18.37■□□□□ 0.53
SMPD1-201ENST00000342245 G3V3G9 751 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 TRIM77I1YAP6 450 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 HUS1O60921 280 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 CD4P01730 458 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 SLC4A1P02730 911 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 CD6P30203 668 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 SLC26A3P40879 764 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 FCGRTP55899 365 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 KCNK10P57789 538 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 EMC2Q15006 297 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 Q5BKY6 102 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 DCAF8Q5TAQ9 597 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 AGAP9Q5VTM2 703 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 CNTN4Q8IWV2 1026 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 DNAJB14Q8TBM8 379 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 LRRC3Q9BY71 257 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 DBNDD1Q9H9R9 158 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 CYP3A43Q9HB55 503 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 FBRSL1Q9HCM7 1045 aaKnown RBP18.36■□□□□ 0.53
SMPD1-201ENST00000342245 TMX2Q9Y320 296 aa18.36■□□□□ 0.53
SMPD1-201ENST00000342245 FAM95CA0A1B0GW59 222 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 GRXCR2A6NFK2 248 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 A8MT66 165 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 H3BMM5 538 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 PRMT5O14744 637 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-201ENST00000342245 BCKDKO14874 412 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 USP12O75317 370 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 EEDO75530 441 aaKnown RBP18.35■□□□□ 0.53
SMPD1-201ENST00000342245 MAGP20916 626 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 CES1P23141 567 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 TGFBR2P37173 567 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 HNF4AP41235 474 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 MAP2K4P45985 399 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 CRKP46108 304 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 SERPINH1P50454 418 aaKnown RBP18.35■□□□□ 0.53
SMPD1-201ENST00000342245 SLC6A3Q01959 620 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 EMX2Q04743 252 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 DGCR6Q14129 220 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 GPR162Q16538 588 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 TECRLQ5HYJ1 363 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 PID1Q7Z2X4 250 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 SLC22A15Q8IZD6 547 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 FLCNQ8NFG4 579 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 HEXDCQ8WVB3 486 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 IPCEF1Q8WWN9 437 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-201ENST00000342245 GTF2H4Q92759 462 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 KCTD15Q96SI1 283 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-201ENST00000342245 TRAF4Q9BUZ4 470 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-201ENST00000342245 KIFC1Q9BW19 673 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 ITPAQ9BY32 194 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 MRPL9Q9BYD2 267 aaKnown RBP18.35■□□□□ 0.53
SMPD1-201ENST00000342245 LEF1Q9UJU2 399 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-201ENST00000342245 PNMA8BQ9ULN7 279 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-201ENST00000342245 ERVW-1Q9UQF0 538 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 LYVE1Q9Y5Y7 322 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 AIREO43918 545 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 CILPO75339 1184 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 GRAP2O75791 330 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 SLITRK5O94991 958 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 ANXA6P08133 673 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 ARSAP15289 507 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 SLC12A2P55011 1212 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 IL5RAQ01344 420 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 ZDHHC17Q8IUH5 632 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 NLGN4XQ8N0W4 816 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 TCAIMQ8N3R3 496 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 SNAPC3Q92966 411 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 ZDHHC15Q96MV8 337 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 PORCNQ9H237 461 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 KCNN2Q9H2S1 579 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 SMURF2Q9HAU4 748 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 SLC52A3Q9NQ40 469 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 TMEM45AQ9NWC5 275 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 SEPT10Q9P0V9 454 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 HMGXB4Q9UGU5 601 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 FEM1BQ9UK73 627 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 NUDT5Q9UKK9 219 aa18.35■□□□□ 0.53
SMPD1-201ENST00000342245 AHSGP02765 367 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms