RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 NIPSNAP2O75323 286 aa20.37■□□□□ 0.85
CLDND1-201ENST00000341181 RFPL1O75677 317 aa20.37■□□□□ 0.85
CLDND1-201ENST00000341181 TOP3BO95985 862 aaKnown RBP20.37■□□□□ 0.85
CLDND1-201ENST00000341181 TAS2R39P59534 338 aa20.37■□□□□ 0.85
CLDND1-201ENST00000341181 CDK3Q00526 305 aa20.37■□□□□ 0.85
CLDND1-201ENST00000341181 NLRP8Q86W28 1048 aa20.37■□□□□ 0.85
CLDND1-201ENST00000341181 SNX19Q92543 992 aa20.37■□□□□ 0.85
CLDND1-201ENST00000341181 CNOT10Q9H9A5 744 aaKnown RBP20.37■□□□□ 0.85
CLDND1-201ENST00000341181 SNX15Q9NRS6 342 aa20.37■□□□□ 0.85
CLDND1-201ENST00000341181 GALPQ9UBC7 116 aa20.37■□□□□ 0.85
CLDND1-201ENST00000341181 PIKFYVEQ9Y2I7 2098 aa20.37■□□□□ 0.85
CLDND1-201ENST00000341181 PHGDHO43175 533 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 RPL6Q02878 288 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 SRSF5Q13243 272 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 PDE1CQ14123 709 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 ZSCAN26Q16670 478 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 HECTD2Q5U5R9 776 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 ADAMTSL4Q6UY14 1074 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 FBXL6Q8N531 539 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 SCG3Q8WXD2 468 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 SGF29Q96ES7 293 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 COX14Q96I36 57 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 ORAI3Q9BRQ5 295 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 AARSD1Q9BTE6 412 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 CLPBQ9H078 707 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 EPN3Q9H201 632 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 WDR26Q9H7D7 661 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 INTS9Q9NV88 658 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 PCYT1BQ9Y5K3 369 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 SGTAO43765 313 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 ZNF7P17097 686 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 CNTFP26441 200 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 TRIM23P36406 574 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 CTSCP53634 463 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 ADARP55265 1226 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 CSTF1Q05048 431 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 USP10Q14694 798 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 PPM1JQ5JR12 505 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 TMEM145Q8NBT3 493 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 HIC2Q96JB3 615 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 C1QTNF7Q9BXJ2 289 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 C12orf65Q9H3J6 166 aaKnown RBP20.36■□□□□ 0.85
CLDND1-201ENST00000341181 C11orf16Q9NQ32 467 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 VPS9D1Q9Y2B5 631 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 TMEM98Q9Y2Y6 226 aa20.36■□□□□ 0.85
CLDND1-201ENST00000341181 OR2AG2A6NM03 316 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 GPR37L1O60883 481 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 DNAJC6O75061 913 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 HNRNPA2B1P22626 353 aaKnown RBP20.35■□□□□ 0.85
CLDND1-201ENST00000341181 HOXA6P31267 233 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 NSG1P42857 185 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 SF3A3Q12874 501 aaKnown RBP eCLIP20.35■□□□□ 0.85
CLDND1-201ENST00000341181 ITIH4Q14624 930 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 LYPLAL1Q5VWZ2 237 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 DOK6Q6PKX4 331 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 GCNT7Q6ZNI0 430 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 BEND7Q8N7W2 519 aaPredicted RBP20.35■□□□□ 0.85
CLDND1-201ENST00000341181 DTWD2Q8NBA8 298 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 SPACA7Q96KW9 195 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 SLC30A3Q99726 388 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 OR2AG1Q9H205 316 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 KCTD5Q9NXV2 234 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 NDUFS2O75306 463 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 PKMP14618 531 aaKnown RBP20.35■□□□□ 0.85
CLDND1-201ENST00000341181 ITGB6P18564 788 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 ATP5DP30049 168 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 CCR5P51681 352 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 USP39Q53GS9 565 aaKnown RBP20.35■□□□□ 0.85
CLDND1-201ENST00000341181 LDLRAP1Q5SW96 308 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 TPRG1LQ5T0D9 272 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 SH2D5Q6ZV89 423 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 RASGEF1AQ8N9B8 481 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 ASB12Q8WXK4 309 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 ISL2Q96A47 359 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 MTBPQ96DY7 904 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 BMFQ96LC9 184 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 TTC1Q99614 292 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 TEX101Q9BY14 249 aa20.35■□□□□ 0.85
CLDND1-201ENST00000341181 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 PFDN6O15212 129 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 ESR1P03372 595 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 PYGBP11216 843 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 ATP1B2P14415 290 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-201ENST00000341181 KRT4P19013 534 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 MSH3P20585 1137 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 MAGEA12P43365 314 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 POLD2P49005 469 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 CSRP3P50461 194 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 TMEM115Q12893 351 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-201ENST00000341181 ZKSCAN8Q15776 578 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-201ENST00000341181 LGSNQ5TDP6 509 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 NAPRTQ6XQN6 538 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 ADGRG6Q86SQ4 1221 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 TMEFF1Q8IYR6 380 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 GIMAP7Q8NHV1 300 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 PCMTD2Q9NV79 361 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 ATXN10Q9UBB4 475 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 VWA7Q9Y334 891 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 MT-ND3P03897 115 aa20.34■□□□□ 0.85
CLDND1-201ENST00000341181 SLC35E2BP0CK96 405 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms