RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 MED16Q9Y2X0 877 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 RAP2CQ9Y3L5 183 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 LRRK1Q38SD2 2015 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 NPIPB8E9PQR5 432 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 TNFRSF10CO14798 259 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 CHUKO15111 745 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 SNX3O60493 162 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 VPS4BO75351 444 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 ZNF217O75362 1048 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 SLCO2B1O94956 709 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 DNTTP04053 509 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 EPHX1P07099 455 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 FGF4P08620 206 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 ALPIP09923 528 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 AOAHP28039 575 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 DRD3P35462 400 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 TRIM23P36406 574 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 SETMARQ53H47 684 aaPredicted RBP7.09□□□□□ -1.27
NUP43-201ENST00000340413 UNC5DQ6UXZ4 953 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 CAMKK1Q8N5S9 505 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 OTUD6BQ8N6M0 293 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 IL17RCQ8NAC3 791 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 CCDC197Q8NCU1 140 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 FAM3CQ92520 227 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 GUCD1Q96NT3 240 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 GTSE1Q9NYZ3 720 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 NCKIPSDQ9NZQ3 722 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 RUVBL2Q9Y230 463 aaKnown RBP7.09□□□□□ -1.27
NUP43-201ENST00000340413 TSC22D4Q9Y3Q8 395 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 USH1CQ9Y6N9 552 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 TTC24A2A3L6 582 aaPredicted RBP7.09□□□□□ -1.27
NUP43-201ENST00000340413 TM7SF2O76062 418 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 CTPS1P17812 591 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 MSH3P20585 1137 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 LIG3P49916 1009 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 CDKN2DP55273 166 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 PKNOX1P55347 436 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 ABCE1P61221 599 aaKnown RBP7.09□□□□□ -1.27
NUP43-201ENST00000340413 GTF2H3Q13889 308 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
NUP43-201ENST00000340413 PTRHD1Q6GMV3 140 aaKnown RBP7.09□□□□□ -1.27
NUP43-201ENST00000340413 SPATA21Q7Z572 469 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 HSD11B1LQ7Z5J1 315 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 TTC7BQ86TV6 843 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 CRLF3Q8IUI8 442 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 CEP97Q8IW35 865 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 CACNA2D3Q8IZS8 1091 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 MYO1HQ8N1T3 1032 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 GPATCH11Q8N954 259 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 TRIM56Q9BRZ2 755 aaKnown RBP7.09□□□□□ -1.27
NUP43-201ENST00000340413 TRIM55Q9BYV6 548 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 ITM2CQ9NQX7 267 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 PIH1D1Q9NWS0 290 aaKnown RBP7.09□□□□□ -1.27
NUP43-201ENST00000340413 TMEM216Q9P0N5 145 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 SLC17A7Q9P2U7 560 aa7.09□□□□□ -1.27
NUP43-201ENST00000340413 A0A1W2PQF6 199 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 SPAG7O75391 227 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 GPC4O75487 556 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 TSPAN12O95859 305 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 ACPPP15309 386 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 KELP23276 732 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 INHBCP55103 352 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 LACTB2Q53H82 288 aaPredicted RBP7.08□□□□□ -1.28
NUP43-201ENST00000340413 SULT1C3Q6IMI6 304 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 PTCRAQ6ISU1 281 aaPredicted RBP7.08□□□□□ -1.28
NUP43-201ENST00000340413 CPLX4Q7Z7G2 160 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 ISCA2Q86U28 154 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 PIANPQ8IYJ0 282 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 FSTL5Q8N475 847 aaPredicted RBP7.08□□□□□ -1.28
NUP43-201ENST00000340413 OR2T34Q8NGX1 318 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 HM13Q8TCT9 377 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 ATL1Q8WXF7 558 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 EZH1Q92800 747 aaPredicted RBP7.08□□□□□ -1.28
NUP43-201ENST00000340413 METTL2AQ96IZ6 378 aaKnown RBP7.08□□□□□ -1.28
NUP43-201ENST00000340413 HIC2Q96JB3 615 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 ZFYVE19Q96K21 471 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 PITPNM3Q9BZ71 974 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 EBF1Q9UH73 591 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 PRR19A6NJB7 356 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 SHISA7A6NL88 538 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 ZNF839A8K0R7 811 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 E5RI56 91 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 NDUFAB1O14561 156 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 UGDHO60701 494 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 FKBP9O95302 570 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 APBB3O95704 486 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 MLYCDO95822 493 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 RPS17P08708 135 aaKnown RBP7.08□□□□□ -1.28
NUP43-201ENST00000340413 C6P13671 934 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 HOXB2P14652 356 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 CREB1P16220 341 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 PRDX6P30041 224 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 DPP6P42658 865 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 ATP4BP51164 291 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 HERVK_113P63132 956 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 SETDB1Q15047 1291 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 RBM20Q5T481 1227 aaKnown RBP7.08□□□□□ -1.28
NUP43-201ENST00000340413 C6orf89Q6UWU4 347 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 CDHR3Q6ZTQ4 885 aa7.08□□□□□ -1.28
NUP43-201ENST00000340413 TAS2R42Q7RTR8 314 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms