RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CTSCP53634 463 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 DR1Q01658 176 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 INSCQ1MX18 579 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 GPR33Q49SQ1 333 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 C14orf28Q4W4Y0 310 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 PERM1Q5SV97 790 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 DET1Q7L5Y6 550 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 CAND1Q86VP6 1230 aaKnown RBP15.04■□□□□ -0
UBE3B-201ENST00000340074 NAGSQ8N159 534 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 NXPE1Q8N323 547 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 PATE1Q8WXA2 126 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 HDAC10Q969S8 669 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 CCDC97Q96F63 343 aaPredicted RBP15.04■□□□□ -0
UBE3B-201ENST00000340074 RUNDC3BQ96NL0 473 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 SYBUQ9NX95 663 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 BFARQ9NZS9 450 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 SLC23A2Q9UGH3 650 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 ASIC3Q9UHC3 531 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 RIMKLBQ9ULI2 386 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 ASPMQ8IZT6 3477 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 KNTC1P50748 2209 aa15.04■□□□□ -0
UBE3B-201ENST00000340074 TRBV5-4A0A0C4DH59 114 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 OR2AG2A6NM03 316 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 EML2O95834 649 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 ZNF7P17097 686 aaPredicted RBP15.03■□□□□ -0
UBE3B-201ENST00000340074 ACRV1P26436 265 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 CLDN6P56747 220 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 B4GALNT1Q00973 533 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 FOXK2Q01167 660 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 ACVR1Q04771 509 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 CACNG1Q06432 222 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 HLTFQ14527 1009 aaKnown RBP eCLIP15.03■□□□□ -0
UBE3B-201ENST00000340074 TMEM220Q6QAJ8 160 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 NLRP9Q7RTR0 991 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 TAS2R42Q7RTR8 314 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 C11orf96Q7Z7L8 435 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 SERPINA9Q86WD7 417 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 NAT8LQ8N9F0 302 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 MCUQ8NE86 351 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 NAT14Q8WUY8 206 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 PEX13Q92968 403 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 NAT6Q93015 286 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 SGF29Q96ES7 293 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 KRT12Q99456 494 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 SCNM1Q9BWG6 230 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 KLC4Q9NSK0 619 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 TBC1D29Q9UFV1 150 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 DNAJC16Q9Y2G8 782 aa15.03■□□□□ -0
UBE3B-201ENST00000340074 FRYQ5TBA9 3013 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 TTI1O43156 1089 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 SNX2O60749 519 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 GOT2P00505 430 aaKnown RBP15.02■□□□□ -0
UBE3B-201ENST00000340074 GLB1P16278 677 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 NMBRP28336 390 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 FOXN2P32314 431 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 MAZP56270 477 aaKnown RBP15.02■□□□□ -0
UBE3B-201ENST00000340074 SHC2P98077 582 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 E2F1Q01094 437 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 INSM1Q01101 510 aaPredicted RBP15.02■□□□□ -0
UBE3B-201ENST00000340074 SMAD1Q15797 465 aaKnown RBP15.02■□□□□ -0
UBE3B-201ENST00000340074 FNBP1LQ5T0N5 605 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 RNASEH2BQ5TBB1 312 aaKnown RBP15.02■□□□□ -0
UBE3B-201ENST00000340074 SYDE1Q6ZW31 735 aaPredicted RBP15.02■□□□□ -0
UBE3B-201ENST00000340074 C17orf82Q86X59 251 aaPredicted RBP15.02■□□□□ -0
UBE3B-201ENST00000340074 JAMLQ86YT9 394 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 PPIL6Q8IXY8 311 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 PIANPQ8IYJ0 282 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 MPP5Q8N3R9 675 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 BEND7Q8N7W2 519 aaPredicted RBP15.02■□□□□ -0
UBE3B-201ENST00000340074 SPATA4Q8NEY3 305 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 OR6P1Q8NGX9 317 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 CCDC74AQ96AQ1 378 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 DCUN1D1Q96GG9 259 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 SERPINB12Q96P63 405 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 COPS8Q99627 209 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 TIMM29Q9BSF4 260 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 OSGEPL1Q9H4B0 414 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 ZDHHC3Q9NYG2 299 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 RABGEF1Q9UJ41 708 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 KLK13Q9UKR3 277 aa15.02■□□□□ -0
UBE3B-201ENST00000340074 TRBV23OR9-2A0A075B6M9 112 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 DNALI1O14645 258 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-201ENST00000340074 CASC3O15234 703 aaKnown RBP15.01□□□□□ -0.01
UBE3B-201ENST00000340074 OPA1O60313 960 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 RALBP11234 206 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 MLNP12872 115 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 IVDP26440 423 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 CLCNKAP51800 687 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 PRAMEP78395 509 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 C2orf54Q08AI8 447 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 DHX34Q14147 1143 aaKnown RBP15.01□□□□□ -0.01
UBE3B-201ENST00000340074 HES3Q5TGS1 186 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 AFTPHQ6ULP2 937 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 TMPRSS7Q7RTY8 843 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 MARCH9Q86YJ5 346 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 ARL14Q8N4G2 192 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 OR6C4Q8NGE1 309 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 MAPK15Q8TD08 544 aa15.01□□□□□ -0.01
UBE3B-201ENST00000340074 ZNF514Q96K75 400 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-201ENST00000340074 CCDC3Q9BQI4 270 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms