RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TMC8Q8IU68 726 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 PSTKQ8IV42 348 aaKnown RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 ZNF611Q8N823 705 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 OR2T12Q8NG77 320 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 AP2M1Q96CW1 435 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 TCOF1Q13428 1488 aaKnown RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 NUP214P35658 2090 aaPredicted RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 ISPDA4D126 451 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 DISC1C4P0D8 188 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 PDPK1O15530 556 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 NDUFB10O96000 172 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 MAP3K8P41279 467 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 RPL35P42766 123 aaKnown RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 NDST1P52848 882 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 ILF2Q12905 390 aaKnown RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 RIN1Q13671 783 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 HSD17B12Q53GQ0 312 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 ADGRG6Q86SQ4 1221 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 TBX5Q99593 518 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 TSNAXQ99598 290 aaKnown RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 HEG1Q9ULI3 1381 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 GAKO14976 1311 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 MAPK14Q16539 360 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 EMID1Q96A84 441 aaPredicted RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 C3orf14Q9HBI5 128 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 TUBE1Q9UJT0 475 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 MAN2B2Q9Y2E5 1009 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 MAST1Q9Y2H9 1570 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 NPC1L1Q9UHC9 1359 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 FGBP02675 491 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 ALDH2P05091 517 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 GK5Q6ZS86 529 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 NKAPQ8N5F7 415 aaKnown RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 POGLUT1Q8NBL1 392 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 HELQQ8TDG4 1101 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 SMPD3Q9NY59 655 aaPredicted RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 MRTO4Q9UKD2 239 aaKnown RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 BARX2Q9UMQ3 279 aaPredicted RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 ERVK-11Q9UQG0 969 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 ZMYM2Q9UBW7 1377 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 HACD1B0YJ81 288 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 HDAC3O15379 428 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 WDPCPO95876 746 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 UGT2B4P06133 528 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 YAP1P46937 504 aaKnown RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 PPATQ06203 517 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 BST1Q10588 318 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 TBRG1Q3YBR2 411 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 LRRC37A5PQ49AS3 106 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 PLEKHG4Q58EX7 1191 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 MPZL3Q6UWV2 235 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 SETD7Q8WTS6 366 aaKnown RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 HOPXQ9BPY8 73 aaPredicted RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 NDRG2Q9UN36 371 aaKnown RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 RAP2CQ9Y3L5 183 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 POMCP01189 267 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 DCKP27707 260 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 RGS6P49758 472 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 ADAM15Q13444 863 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 ALX1Q15699 326 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 SCGB1C1Q8TD33 95 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 IGDCC4Q8TDY8 1250 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 BRD9Q9H8M2 597 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 ASF1AQ9Y294 204 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 CLCA1A8K7I4 914 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 A8MV72 311 aaPredicted RBP12.74□□□□□ -0.37
USP47-202ENST00000339865 PRR5-ARHGAP8B1AHC4 643 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 EPHB6O15197 1021 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 CFIP05156 583 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 ARHGAP8P85298 464 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 LIN52Q52LA3 116 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 KCTD9Q7L273 389 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 ZNF550Q7Z398 422 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 TMPRSS11BQ86T26 416 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 NDUFAF4Q9P032 175 aa12.74□□□□□ -0.37
USP47-202ENST00000339865 PTCH1Q13635 1447 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 HYKKA2RU49 373 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 CABYRO75952 493 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ZNF823P16415 610 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 PNLDC1Q8NA58 520 aaKnown RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 OR7D4Q8NG98 312 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 RIPOR3Q96MK2 946 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 FBRSQ9HAH7 460 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 PDE10AQ9Y233 779 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 MAGEC1O60732 1142 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 TRBC1P01850 177 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 CCNB1P14635 433 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 RAB4BP61018 213 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 SF1Q15637 639 aaKnown RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 ZNF598Q86UK7 904 aaKnown RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 MCOLN2Q8IZK6 566 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 LRRN4CLQ8ND94 238 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 TAS1R2Q8TE23 839 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 PEX13Q92968 403 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ITFG2Q969R8 447 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 FEM1CQ96JP0 617 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 ERVK-5Q9HDB9 667 aa12.73□□□□□ -0.37
USP47-202ENST00000339865 C14orf166Q9Y224 244 aaKnown RBP12.73□□□□□ -0.37
USP47-202ENST00000339865 ARAP3Q8WWN8 1544 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms