RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 LRRC36Q1X8D7 754 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 MYLK3Q32MK0 819 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 TBC1D25Q3MII6 688 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 ZBED5Q49AG3 693 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 KCTD21Q4G0X4 260 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 DCAF6Q58WW2 860 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 TCHHL1Q5QJ38 904 aaPredicted RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 GPR158Q5T848 1215 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 VWA5B1Q5TIE3 1220 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 TXNDC8Q6A555 127 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 TANGO2Q6ICL3 276 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 LRRC8EQ6NSJ5 796 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 RWDD4Q6NW29 188 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 C8orf82Q6P1X6 216 aaPredicted RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 FBXL19Q6PCT2 694 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 RAB44Q7Z6P3 723 aaPredicted RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 PIGZQ86VD9 579 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 FAM131BQ86XD5 332 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 CAMK1DQ8IU85 385 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 CHERPQ8IWX8 916 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 RBM12BQ8IXT5 1001 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 LILRA2Q8N149 483 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 PELI3Q8N2H9 469 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 FSTL5Q8N475 847 aaPredicted RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 C2CD4AQ8NCU7 369 aaPredicted RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 TSPAN14Q8NG11 270 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 ZNF420Q8TAQ5 688 aaPredicted RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 ZSCAN18Q8TBC5 510 aaPredicted RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 PNPT1Q8TCS8 783 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 POP5Q969H6 163 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 RCN3Q96D15 328 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 NMD3Q96D46 503 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 SLC45A3Q96JT2 553 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 SCYL1Q96KG9 808 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 GPR78Q96P69 363 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 LRRC3BQ96PB8 259 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 SLC22A12Q96S37 553 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 RANBP9Q96S59 729 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 IL12RB2Q99665 862 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 PKP2Q99959 881 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 KXD1Q9BQD3 176 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 TUBA1CQ9BQE3 449 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 SLC46A2Q9BY10 475 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 SMG9Q9H0W8 520 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 CLK4Q9HAZ1 481 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 ARNT2Q9HBZ2 717 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 PFDN4Q9NQP4 134 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 IARS2Q9NSE4 1012 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 CCM2LQ9NUG4 571 aaPredicted RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 CHCHD3Q9NX63 227 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 GDE1Q9NZC3 331 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 IL37Q9NZH6 218 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 TMEM181Q9P2C4 612 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 RSL24D1Q9UHA3 163 aaKnown RBP6.32□□□□□ -1.4
ZNF28-201ENST00000339844 SLC39A10Q9ULF5 831 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 GREB1Q4ZG55 1949 aa6.32□□□□□ -1.4
ZNF28-201ENST00000339844 OBSL1O75147 1896 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 FAM92AA1XBS5 289 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 C2orf78A6NCI8 922 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 ZNF840PA6NDX5 716 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 PSMD12O00232 456 aaPredicted RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 UBDO15205 165 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 MATN3O15232 486 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 NRP2O60462 931 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 RNASEH2AO75792 299 aaKnown RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 MATN4O95460 622 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 FGF19O95750 216 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 TOP3BO95985 862 aaKnown RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 SBK3P0C264 359 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 SLC35E2BP0CK96 405 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 CDK4P11802 303 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 IMPDH2P12268 514 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 HSD17B1P14061 328 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 HOXB6P17509 224 aaKnown RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 CDH2P19022 906 aaPredicted RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 TFE3P19532 575 aaPredicted RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 IMPDH1P20839 514 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 IL10P22301 178 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 YWHAQP27348 245 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 CD68P34810 354 aaPredicted RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 MAP2K3P46734 347 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 CD151P48509 253 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 CLCN5P51795 746 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 NME5P56597 212 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 DAOAP59103 153 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 TPI1P60174 286 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 CRADDP78560 199 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 MRPS22P82650 360 aaKnown RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 HPCAP84074 193 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 ZXDAP98168 799 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 PFKPQ01813 784 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 NRG1Q02297 640 aaPredicted RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 GRSF1Q12849 480 aaKnown RBP eCLIP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 SPIDRQ14159 915 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 ACAP2Q15057 778 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 TRIP4Q15650 581 aaPredicted RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 RAB41Q5JT25 222 aa6.31□□□□□ -1.4
ZNF28-201ENST00000339844 ACBD5Q5T8D3 534 aaPredicted RBP6.31□□□□□ -1.4
ZNF28-201ENST00000339844 LCE2AQ5TA79 106 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms