RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 BOCQ9BWV1 1114 aa16.52■□□□□ 0.24
SFN-201ENST00000339276 ZCCHC2Q9C0B9 1178 aaKnown RBP16.52■□□□□ 0.24
SFN-201ENST00000339276 RMI1Q9H9A7 625 aa16.52■□□□□ 0.24
SFN-201ENST00000339276 EPB41L5Q9HCM4 733 aa16.52■□□□□ 0.24
SFN-201ENST00000339276 CATSPERZQ9NTU4 200 aa16.52■□□□□ 0.24
SFN-201ENST00000339276 IL1RAPL1Q9NZN1 696 aa16.52■□□□□ 0.24
SFN-201ENST00000339276 MARCH4Q9P2E8 410 aaPredicted RBP16.52■□□□□ 0.24
SFN-201ENST00000339276 CHMP2BQ9UQN3 213 aa16.52■□□□□ 0.24
SFN-201ENST00000339276 ST14Q9Y5Y6 855 aa16.52■□□□□ 0.24
SFN-201ENST00000339276 CEP250Q9BV73 2442 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 OR2AG2A6NM03 316 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 GPR89AB7ZAQ6 455 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 GOLGA8KD6RF30 607 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 E7ESA3 106 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 GOLGA8TH3BQL2 631 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 GRID2O43424 1007 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 GPR89BP0CG08 455 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 PAMP19021 973 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 AK4P27144 223 aaPredicted RBP16.51■□□□□ 0.23
SFN-201ENST00000339276 GRK6P43250 576 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 ARCN1P48444 511 aaKnown RBP16.51■□□□□ 0.23
SFN-201ENST00000339276 CTBSQ01459 385 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 PDIA2Q13087 525 aaKnown RBP16.51■□□□□ 0.23
SFN-201ENST00000339276 GTF2H3Q13889 308 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 FASTKD3Q14CZ7 662 aaKnown RBP16.51■□□□□ 0.23
SFN-201ENST00000339276 FASTKD1Q53R41 847 aaKnown RBP16.51■□□□□ 0.23
SFN-201ENST00000339276 LDB1Q86U70 411 aaPredicted RBP16.51■□□□□ 0.23
SFN-201ENST00000339276 NRROSQ86YC3 692 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 TRAPPC5Q8IUR0 188 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 ANKMY2Q8IV38 441 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 ZNF547Q8IVP9 402 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 EID2Q8N6I1 236 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 SGSM3Q96HU1 749 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 TRNAU1APQ9NX07 287 aaKnown RBP16.51■□□□□ 0.23
SFN-201ENST00000339276 ZDHHC3Q9NYG2 299 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 TEX264Q9Y6I9 313 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 CSNK1G3Q9Y6M4 447 aa16.51■□□□□ 0.23
SFN-201ENST00000339276 IGLV3-16A0A075B6K0 115 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 LMO7DNF2Z398 122 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 TRIM38O00635 465 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 TM4SF5O14894 197 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 YY2O15391 372 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 CD3EAPO15446 510 aaKnown RBP16.5■□□□□ 0.23
SFN-201ENST00000339276 POLBP06746 335 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 ACP5P13686 325 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 CAV1Q03135 178 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 ILF3Q12906 894 aaKnown RBP eCLIP16.5■□□□□ 0.23
SFN-201ENST00000339276 CRYMQ14894 314 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 CENPUQ71F23 418 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 CHST15Q7LFX5 561 aaPredicted RBP16.5■□□□□ 0.23
SFN-201ENST00000339276 TAF8Q7Z7C8 310 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 PIP4P1Q86T03 277 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 LRRTM4Q86VH4 590 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 OTUD6BQ8N6M0 293 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 FBXO36Q8NEA4 188 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 OR4C6Q8NH72 309 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 GPBAR1Q8TDU6 330 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 RHBDD1Q8TEB9 315 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.5■□□□□ 0.23
SFN-201ENST00000339276 LRRC39Q96DD0 335 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 SGF29Q96ES7 293 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 CFAP36Q96G28 342 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 DCUN1D1Q96GG9 259 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 PLAC1Q9HBJ0 212 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 ZDHHC18Q9NUE0 388 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 NLGN3Q9NZ94 848 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 PCOLCE2Q9UKZ9 415 aa16.5■□□□□ 0.23
SFN-201ENST00000339276 NEMP2A6NFY4 417 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 SGTAO43765 313 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 ANXA6P08133 673 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 RHOXF2BP0C7M4 288 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 RALBP11234 206 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 LRP8Q14114 963 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 ITIH4Q14624 930 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 INAVAQ3KP66 663 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 SLC30A9Q6PML9 568 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 TMEM220Q6QAJ8 160 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 UNC5AQ6ZN44 842 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 C11orf96Q7Z7L8 435 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 GKN2Q86XP6 184 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 ZBED8Q8IZ13 594 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 UNC5BQ8IZJ1 945 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 BEND7Q8N7W2 519 aaPredicted RBP16.49■□□□□ 0.23
SFN-201ENST00000339276 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.49■□□□□ 0.23
SFN-201ENST00000339276 DEFB124Q8NES8 71 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 RHOXF2Q9BQY4 288 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 NAT9Q9BTE0 207 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 GSDMCQ9BYG8 508 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 FAM114A2Q9NRY5 505 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 SLC23A2Q9UGH3 650 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 ZC3H7BQ9UGR2 993 aaKnown RBP16.49■□□□□ 0.23
SFN-201ENST00000339276 DOLKQ9UPQ8 538 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 KCNK6Q9Y257 313 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 FAM169AQ9Y6X4 670 aa16.49■□□□□ 0.23
SFN-201ENST00000339276 ZFC3H1O60293 1989 aaKnown RBP16.49■□□□□ 0.23
SFN-201ENST00000339276 ARID1BQ8NFD5 2236 aaPredicted RBP16.49■□□□□ 0.23
SFN-201ENST00000339276 COL5A1P20908 1838 aaPredicted RBP16.48■□□□□ 0.23
SFN-201ENST00000339276 CFAP99D6REC4 459 aa16.48■□□□□ 0.23
SFN-201ENST00000339276 KMOO15229 486 aa16.48■□□□□ 0.23
SFN-201ENST00000339276 SIGLEC6O43699 453 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms