RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SLC27A4Q6P1M0 643 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 IRF2BP2Q7Z5L9 587 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ADAT2Q7Z6V5 191 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 SLC35F3Q8IY50 421 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 OR52H1Q8NGJ2 320 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 RELTQ969Z4 430 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 RNF170Q96K19 258 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 KCTD15Q96SI1 283 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 EMC7Q9NPA0 242 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 AAASQ9NRG9 546 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TRMT13Q9NUP7 481 aaKnown RBP4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TBC1D13Q9NVG8 400 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 NSMCE4AQ9NXX6 385 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 CPNE7Q9UBL6 633 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 ANKRD6Q9Y2G4 727 aa4.13□□□□□ -1.75
NEDD4-201ENST00000338963 TRIM49D1C9J1S8 452 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NUPL2O15504 423 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CIDEAO60543 219 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NBNO60934 754 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TMEM63AO94886 807 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 MBP02144 154 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SEPHS1P49903 392 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SLC7A2P52569 658 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ATXN1P54253 815 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CDH4P55283 916 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ERVFC1P60507 584 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 RAB2AP61019 212 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SKP1P63208 163 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 KCNH2Q12809 1159 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 MESDQ14696 234 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 MICAQ29983 383 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ARMC6Q6NXE6 501 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 GALNT10Q86SR1 603 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NAGSQ8N159 534 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NKAIN3Q8N8D7 197 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NSMAFQ92636 917 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 KAT5Q92993 513 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TNFRSF25Q93038 417 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SLC38A4Q969I6 547 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 LRRC4CQ9HCJ2 640 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 C6orf50Q9HD87 102 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ERVK-5Q9HDB9 667 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ENTPD7Q9NQZ7 604 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CD274Q9NZQ7 290 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TRPS1Q9UHF7 1281 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 BTNL2Q9UIR0 455 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CA5BQ9Y2D0 317 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 FOXO6A8MYZ6 492 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TCP10L2B9ZVM9 353 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NDUFS8O00217 210 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 DLGAP1O14490 977 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SYN3O14994 580 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CASC3O15234 703 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SLC43A1O75387 559 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PIAS1O75925 651 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PTBP3O95758 552 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PAK4O96013 591 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 RPLP0P05388 317 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CTSHP09668 335 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CCNYL3P0C7X3 344 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 JUPP14923 745 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PBLDP30039 288 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SSTR3P32745 418 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CD96P40200 585 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PER3P56645 1201 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CXCR4P61073 352 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NKX3-2P78367 333 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 GLO1Q04760 184 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ILF3Q12906 894 aaKnown RBP eCLIP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 GPR50Q13585 617 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PSMD5Q16401 504 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CDKL4Q5MAI5 379 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 AVPI1Q5T686 147 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 GPRC6AQ5T6X5 926 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 LRRC38Q5VT99 294 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 HACD4Q5VWC8 232 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 RPL13AP3Q6NVV1 102 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 AFTPHQ6ULP2 937 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TMPRSS9Q7Z410 1059 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 POLNQ7Z5Q5 900 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 HIPK1Q86Z02 1210 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 KATNAL2Q8IYT4 538 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 AVL9Q8NBF6 648 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ZSWIM2Q8NEG5 633 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 DCPSQ96C86 337 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 RHBDF1Q96CC6 855 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ZBED3Q96IU2 234 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 CSPG4P5Q96PW8 444 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SPHK1Q9NYA1 384 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 PURGQ9UJV8 347 aaKnown RBP4.12□□□□□ -1.75
NEDD4-201ENST00000338963 MGAT4AQ9UM21 535 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 MAN2B2Q9Y2E5 1009 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 SLC27A5Q9Y2P5 690 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 KCNIP3Q9Y2W7 256 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 TRAPPC13A5PLN9 417 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 NUDT19A8MXV4 375 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 ALDH1A2O94788 518 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 KCNH1O95259 989 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 DPEP1P16444 411 aa4.12□□□□□ -1.75
NEDD4-201ENST00000338963 GABRB3P28472 473 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms