RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ZBED8Q8IZ13 594 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 AGGF1Q8N302 714 aaeCLIP11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 FBXO36Q8NEA4 188 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 GPR150Q8NGU9 434 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 NETO1Q8TDF5 533 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 SAP25Q8TEE9 199 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 CFAP36Q96G28 342 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 OR2M4Q96R27 311 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 GSDMCQ9BYG8 508 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ZDHHC18Q9NUE0 388 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 GPR34Q9UPC5 381 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 CHMP2BQ9UQN3 213 aa11.77□□□□□ -0.53
SPTLC1-202ENST00000337841 ZFHX2Q9C0A1 2572 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 CEP192Q8TEP8 1941 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 ZCWPW2A0A1B0GU75 182 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 QSOX1O00391 747 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 CHUKO15111 745 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 SCAMP1O15126 338 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 GPR39O43194 453 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 SDC3O75056 442 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 DNAJC6O75061 913 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 BANF1O75531 89 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 AP2A2O94973 939 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 FUCA1P04066 466 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 GSTA2P09210 222 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 ZNF7P17097 686 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 VCLP18206 1134 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 CA5AP35218 305 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 NSG1P42857 185 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 MAGEA4P43358 317 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 CARSP49589 748 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 IL9RQ01113 521 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 LRP8Q14114 963 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 CRYMQ14894 314 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 DBN1Q16643 649 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 LVRNQ6Q4G3 990 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 UNC5AQ6ZN44 842 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 DBX2Q6ZNG2 339 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 CHST15Q7LFX5 561 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 LRRTM4Q86VH4 590 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 GATAD2AQ86YP4 633 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 TRAPPC5Q8IUR0 188 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 PIANPQ8IYJ0 282 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 RBFAQ8N0V3 343 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 SLC25A45Q8N413 288 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 RASGEF1AQ8N9B8 481 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 RHBDD1Q8TEB9 315 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 SETD7Q8WTS6 366 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 UBXN4Q92575 508 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 SGF29Q96ES7 293 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 PDXPQ96GD0 296 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 TMEM168Q9H0V1 697 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 TCEAL2Q9H3H9 227 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 PPANQ9NQ55 473 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 PNMA8BQ9ULN7 279 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 VPS9D1Q9Y2B5 631 aa11.76□□□□□ -0.53
SPTLC1-202ENST00000337841 IGLV3-16A0A075B6K0 115 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 KLHL33A6NCF5 533 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 LMO7DNF2Z398 122 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 TPP1O14773 563 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 YY2O15391 372 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 FLRT2O43155 660 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 POP7O75817 140 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 PRSS56P0CW18 603 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 OGNP20774 298 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 GRK6P43250 576 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 CTBSQ01459 385 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 FRG1Q14331 258 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 KHDC1Q4VXA5 237 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 HSP90AA5PQ58FG0 334 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 RNF187Q5TA31 235 aaPredicted RBP11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 C3orf62Q6ZUJ4 267 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 DET1Q7L5Y6 550 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 KCNMB4Q86W47 210 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 EIF1ADQ8N9N8 165 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 LRRN4CLQ8ND94 238 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 ZNF548Q8NEK5 533 aaPredicted RBP11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 GPBAR1Q8TDU6 330 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 GLMNQ92990 594 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 FMO2Q99518 471 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 TRIM56Q9BRZ2 755 aaKnown RBP11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 FAM167BQ9BTA0 163 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 LRRC61Q9BV99 259 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 DUSP23Q9BVJ7 150 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 CLPBQ9H078 707 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 VPS37BQ9H9H4 285 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 UCKL1Q9NWZ5 548 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 MARCH4Q9P2E8 410 aaPredicted RBP11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 PRKAB1Q9Y478 270 aa11.75□□□□□ -0.53
SPTLC1-202ENST00000337841 OR2AG2A6NM03 316 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 GOLGA8KD6RF30 607 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 GOLGA8TH3BQL2 631 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 PRMT5O14744 637 aaPredicted RBP11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 GSTM1P09488 218 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 OR56A5P0C7T3 313 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 ERVK-10P10266 1014 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 CD59P13987 128 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 ARNTP27540 789 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 CLCNKAP51800 687 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 B4GALNT1Q00973 533 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms