RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SLC24A5Q71RS6 500 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 TRIM39Q9HCM9 518 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 NUDT4Q9NZJ9 180 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 IQCF5A8MTL0 148 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 KLF11O14901 512 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 MAPK9P45984 424 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 CACNG1Q06432 222 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 KLHL12Q53G59 568 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 TCAIMQ8N3R3 496 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 TIFAQ96CG3 184 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 MAGEH1Q9H213 219 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 MIOSQ9NXC5 875 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 EIF2B4Q9UI10 523 aaKnown RBP13.64□□□□□ -0.23
RTN4-202ENST00000337526 CNOT6Q9ULM6 557 aaKnown RBP13.64□□□□□ -0.23
RTN4-202ENST00000337526 PPM1HQ9ULR3 514 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 FAM159BA6NKW6 160 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 PSMD11O00231 422 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 AGRPO00253 132 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
RTN4-202ENST00000337526 SCELO95171 688 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 OR6A2O95222 327 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 UGT2B4P06133 528 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 ELFN1P0C7U0 828 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 PRKAR2AP13861 404 aaKnown RBP13.64□□□□□ -0.23
RTN4-202ENST00000337526 RCVRNP35243 200 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 CCNYL2Q5T2Q4 361 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 CAPN13Q6MZZ7 669 aaPredicted RBP13.64□□□□□ -0.23
RTN4-202ENST00000337526 ZBTB2Q8N680 514 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 HTRA1Q92743 480 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 EZH1Q92800 747 aaPredicted RBP13.64□□□□□ -0.23
RTN4-202ENST00000337526 HPS1Q92902 700 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 C1GALT1C1Q96EU7 318 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 OR52B2Q96RD2 323 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 ZNF541Q9H0D2 1346 aa13.64□□□□□ -0.23
RTN4-202ENST00000337526 SLC28A2O43868 658 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 CDK14O94921 469 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 SEPHS1P49903 392 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 NDST2P52849 883 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.63□□□□□ -0.23
RTN4-202ENST00000337526 MTMR14Q8NCE2 650 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 PIK3C3Q8NEB9 887 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 HM13Q8TCT9 377 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 AP3S1Q92572 193 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 FCRL5Q96RD9 977 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 TUBGCP5Q96RT8 1024 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 GINS4Q9BRT9 223 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
RTN4-202ENST00000337526 ACSL4O60488 711 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 XRCC1P18887 633 aaPredicted RBP13.63□□□□□ -0.23
RTN4-202ENST00000337526 STAT5AP42229 794 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 NAE1Q13564 534 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 KCNJ11Q14654 390 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 SLC39A4Q6P5W5 647 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 AHSA2Q719I0 299 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 COLGALT2Q8IYK4 626 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 TEX47Q8TBZ9 253 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 PRDM8Q9NQV8 689 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 NDOR1Q9UHB4 597 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 POLR1DQ9Y2S0 133 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 MRPS23Q9Y3D9 190 aaKnown RBP13.63□□□□□ -0.23
RTN4-202ENST00000337526 INSIG1O15503 277 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 SLC35G4P0C7Q5 338 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 SLC7A1P30825 629 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 ASMTP46597 345 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 TCEA2Q15560 299 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 ANKRD46Q86W74 232 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 POMGNT2Q8NAT1 580 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 PDE10AQ9Y233 779 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 CARNS1A5YM72 827 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 FPGTO14772 594 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 ESR1P03372 595 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 FESP07332 822 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 SLC18A2Q05940 514 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 IL10RBQ08334 325 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 GTF2H2Q13888 395 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 CNPY1Q3B7I2 92 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 GTF2H2CQ6P1K8 395 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 TMPRSS11BQ86T26 416 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 NTAN1Q96AB6 310 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 NCKAP1Q9Y2A7 1128 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 TRIM17Q9Y577 477 aa13.63□□□□□ -0.23
RTN4-202ENST00000337526 KAT6AQ92794 2004 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 A0A1B0GVM2 712 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 TCAF2A6NFQ2 919 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 C1QTNF3-AMACRE9PGA6 284 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 SPAM1P38567 509 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 ELP6Q0PNE2 266 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 NCBP2-AS2Q69YL0 99 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 CIR1Q86X95 450 aaPredicted RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 RAVER1Q8IY67 606 aaKnown RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 TRNAU1APQ9NX07 287 aaKnown RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 FKBPLQ9UIM3 349 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 H3BM21 787 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 CCNYL3P0C7X3 344 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 CHSY3Q70JA7 882 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 IKBIPQ70UQ0 350 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 C11orf65Q8NCR3 313 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 CSGALNACT1Q8TDX6 532 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 FAR1Q8WVX9 515 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms