RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 FAAH2Q6GMR7 532 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 LCLAT1Q6UWP7 414 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 ZYG11AQ6WRX3 759 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 TNFAIP8L1Q8WVP5 186 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 CDCA5Q96FF9 252 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 MND1Q9BWT6 205 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.99□□□□□ -0.33
HLCS-201ENST00000336648 CLDN9O95484 217 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 C22orf31O95567 290 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 LAMP2P13473 410 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 RHOQP17081 205 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 ALDH4A1P30038 563 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 MTHFRP42898 656 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 SNX20Q7Z614 316 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 ZFPM1Q8IX07 1006 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 FCGR1BQ92637 280 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 PIGKQ92643 395 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 COLEC10Q9Y6Z7 277 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 AGRPO00253 132 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 BUD23O43709 281 aaKnown RBP12.99□□□□□ -0.33
HLCS-201ENST00000336648 STK16O75716 305 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 NR4A1P22736 598 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 SPAM1P38567 509 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 CASP7P55210 303 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 CCNYL2Q5T2Q4 361 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 FOXR1Q6PIV2 292 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 CRTC3Q6UUV7 619 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 C11orf65Q8NCR3 313 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 NUSAP1Q9BXS6 441 aaKnown RBP12.99□□□□□ -0.33
HLCS-201ENST00000336648 PCBD2Q9H0N5 130 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 TNKS2Q9H2K2 1166 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 PNPOQ9NVS9 261 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 C2P06681 752 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 TEAD4Q15561 434 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.99□□□□□ -0.33
HLCS-201ENST00000336648 IRF2BP2Q7Z5L9 587 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 CLIP3Q96DZ5 547 aa12.99□□□□□ -0.33
HLCS-201ENST00000336648 PDP1Q9P0J1 537 aaPredicted RBP12.99□□□□□ -0.33
HLCS-201ENST00000336648 PRAMEF33A0A0G2JMD5 474 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 PRR5-ARHGAP8B1AHC4 643 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 PRAMEF10O60809 474 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 CALCAP01258 141 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 ARHGAP8P85298 464 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 TUSC3Q13454 348 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 SNAPC1Q16533 368 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 TNS4Q8IZW8 715 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 CLPTM1LQ96KA5 538 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 TRNT1Q96Q11 434 aaKnown RBP12.98□□□□□ -0.33
HLCS-201ENST00000336648 UNC93B1Q9H1C4 597 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 PCDHB9Q9Y5E1 797 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 SMIM35A0A1B0GVV1 85 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 IDSP22304 550 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 ADRA1BP35368 520 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 DCST1Q5T197 706 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 SPERTQ8NA61 448 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 NKD2Q969F2 451 aaPredicted RBP12.98□□□□□ -0.33
HLCS-201ENST00000336648 CENPNQ96H22 339 aaPredicted RBP12.98□□□□□ -0.33
HLCS-201ENST00000336648 FAXDC2Q96IV6 333 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 DDX4Q9NQI0 724 aaKnown RBP12.98□□□□□ -0.33
HLCS-201ENST00000336648 MEMO1Q9Y316 297 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 TNFRSF11BO00300 401 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 MEIS2O14770 477 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 PAGE1O75459 146 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 MAP2K5Q13163 448 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 FAM151BQ6UXP7 276 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 PLCZ1Q86YW0 608 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 CPA6Q8N4T0 437 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 RNF31Q96EP0 1072 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 COPS4Q9BT78 406 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 TAS2R7Q9NYW3 318 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 GLB1L3Q8NCI6 653 aaPredicted RBP12.98□□□□□ -0.33
HLCS-201ENST00000336648 PIGXQ8TBF5 258 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 SLC22A17Q8WUG5 538 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 S100PBPQ96BU1 408 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 C5orf34Q96MH7 638 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 HSD17B14Q9BPX1 270 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 MCMBPQ9BTE3 642 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 E9PCH4 1651 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 GSTT2BP0CG30 244 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 ITPKBP27987 946 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 TAS2R40P59535 323 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 E2F2Q14209 437 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 LRRC69Q6ZNQ3 347 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 CASZ1Q86V15 1759 aa12.98□□□□□ -0.33
HLCS-201ENST00000336648 H3BM21 787 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 FPGTO14772 594 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 FADS2O95864 444 aaKnown RBP12.97□□□□□ -0.33
HLCS-201ENST00000336648 CYP3A5P20815 502 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 CTNNB1P35222 781 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 ZNF132P52740 706 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 LCP2Q13094 533 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 PARP8Q8N3A8 854 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 GPER1Q99527 375 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 GBA3Q9H227 469 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 HPF1Q9NWY4 346 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 TISP43B9A030 160 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 CLDN4O14493 209 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 PDCD5O14737 125 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 ORC5O43913 435 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms