RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 VN1R3Q9BXE9 311 aa14.7□□□□□ -0.06
UBA1-201ENST00000335972 SDR39U1Q9NRG7 319 aaPredicted RBP14.7□□□□□ -0.06
UBA1-201ENST00000335972 SMAD6O43541 496 aaKnown RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 CAPN1P07384 714 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 PCNAP12004 261 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 TM4SF4P48230 202 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 GSK3BP49841 420 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 MTPNP58546 118 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 RHOAP61586 193 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 CXorf57Q6NSI4 855 aaKnown RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 IL27RAQ6UWB1 636 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.69□□□□□ -0.063e-7■■□□□ 13.2
UBA1-201ENST00000335972 MBOAT1Q6ZNC8 495 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 GALNT7Q86SF2 657 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 CMTR2Q8IYT2 770 aaKnown RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 TRIML2Q8N7C3 387 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 RHEBL1Q8TAI7 183 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 CYGBQ8WWM9 190 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 GPATCH1Q9BRR8 931 aaKnown RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 OAZ3Q9UMX2 235 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 KRT87PA6NCN2 255 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 FGF4P08620 206 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 ACADVLP49748 655 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 LIPEQ05469 1076 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 BLOC1S3Q6QNY0 202 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 EPHX4Q8IUS5 362 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 METTL6Q8TCB7 284 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 FATE1Q969F0 183 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 MTFMTQ96DP5 389 aaKnown RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 FBXL20Q96IG2 436 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 TNKS2Q9H2K2 1166 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 NSUN3Q9H649 340 aaKnown RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 PLXNA3P51805 1871 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 F11P03951 625 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 PYGLP06737 847 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 RPS17P08708 135 aaKnown RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 MBL2P11226 248 aaPredicted RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 PAX3P23760 479 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 HSPA7P48741 367 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 SELPLGQ14242 412 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 GPRIN3Q6ZVF9 776 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 FRA10AC1Q70Z53 315 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 KIAA2013Q8IYS2 634 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 TSPAN14Q8NG11 270 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 SPATA17Q96L03 361 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 INTS10Q9NVR2 710 aaKnown RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 OAS3Q9Y6K5 1087 aaKnown RBP14.69□□□□□ -0.06
UBA1-201ENST00000335972 PRSS21Q9Y6M0 314 aa14.69□□□□□ -0.06
UBA1-201ENST00000335972 ANKRD36A6QL64 1941 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 CCDC154A6NI56 674 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 TBC1D4O60343 1298 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 CLDN11O75508 207 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 SNUPNO95149 360 aaKnown RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 INHAP05111 366 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 HMGA1P17096 107 aaKnown RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 SMAD3P84022 425 aaKnown RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 ZXDBP98169 803 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 TXNDC8Q6A555 127 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 ANKS3Q6ZW76 656 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 ZNF786Q8N393 782 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 ZNF599Q96NL3 588 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 EFHD1Q9BUP0 239 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 DUS2Q9NX74 493 aaKnown RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 TRAP1Q12931 704 aaKnown RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 PPP1R8Q12972 351 aaKnown RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 TGFBIQ15582 683 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 ARMC12Q5T9G4 340 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 CHST15Q7LFX5 561 aaPredicted RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 AHI1Q8N157 1196 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 CLHC1Q8NHS4 586 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 ZNF597Q96LX8 424 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 KCTD14Q9BQ13 255 aaPredicted RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 SLC2A11Q9BYW1 496 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 FARSBQ9NSD9 589 aaKnown RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 TRPM5Q9NZQ8 1165 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 CLEC4EQ9ULY5 219 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 hCG_2014768A0A024R1R8 64 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 SLC22A3O75751 556 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 PIM1P11309 404 aaPredicted RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 CSKP41240 450 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 PSMD8P48556 350 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 ALDH7A1P49419 539 aaKnown RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 TPGS1Q6ZTW0 290 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 APCDD1Q8J025 514 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 ARL14EPQ8N8R7 260 aaPredicted RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 TMEM125Q96AQ2 219 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 C17orf80Q9BSJ5 609 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 CIPCQ9C0C6 399 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 ALG2Q9H553 416 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 SMOXQ9NWM0 555 aa14.68□□□□□ -0.06
UBA1-201ENST00000335972 MAGED1Q9Y5V3 778 aaPredicted RBP14.68□□□□□ -0.06
UBA1-201ENST00000335972 E2F3O00716 465 aa14.67□□□□□ -0.06
UBA1-201ENST00000335972 RSL1D1O76021 490 aaKnown RBP14.67□□□□□ -0.06
UBA1-201ENST00000335972 ESRRBO95718 433 aa14.67□□□□□ -0.06
UBA1-201ENST00000335972 G6PDP11413 515 aa14.67□□□□□ -0.06
UBA1-201ENST00000335972 GJA1P17302 382 aa14.67□□□□□ -0.06
UBA1-201ENST00000335972 YAP1P46937 504 aaKnown RBP14.67□□□□□ -0.06
UBA1-201ENST00000335972 OR4D2P58180 307 aa14.67□□□□□ -0.06
UBA1-201ENST00000335972 NR6A1Q15406 480 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms