RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 BIRC8Q96P09 236 aa17.29■□□□□ 0.36
CHGA-202ENST00000334654 MRPL40Q9NQ50 206 aaKnown RBP17.29■□□□□ 0.36
CHGA-202ENST00000334654 ZFATQ9P243 1243 aa17.29■□□□□ 0.36
CHGA-202ENST00000334654 KLF15Q9UIH9 416 aa17.29■□□□□ 0.36
CHGA-202ENST00000334654 ANKRD6Q9Y2G4 727 aa17.29■□□□□ 0.36
CHGA-202ENST00000334654 PCDHGA5Q9Y5G8 931 aa17.29■□□□□ 0.36
CHGA-202ENST00000334654 A0A087WUV0 522 aaPredicted RBP17.28■□□□□ 0.36
CHGA-202ENST00000334654 TNFRSF10CO14798 259 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 NUAK1O60285 661 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 CDK14O94921 469 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 ASMTLO95671 621 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 ATP1B2P14415 290 aaPredicted RBP17.28■□□□□ 0.36
CHGA-202ENST00000334654 PMLP29590 882 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 CTSKP43235 329 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 ALG11Q2TAA5 492 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 MAP9Q49MG5 647 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 ZNF549Q6P9A3 640 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 SLC23A3Q6PIS1 610 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 MARK2Q7KZI7 788 aaKnown RBP17.28■□□□□ 0.36
CHGA-202ENST00000334654 SLC26A11Q86WA9 606 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 ZNF547Q8IVP9 402 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 RBFAQ8N0V3 343 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 OTUD6BQ8N6M0 293 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 UBLCP1Q8WVY7 318 aaPredicted RBP17.28■□□□□ 0.36
CHGA-202ENST00000334654 TSACCQ96A04 125 aaPredicted RBP17.28■□□□□ 0.36
CHGA-202ENST00000334654 SGF29Q96ES7 293 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 CYTH2Q99418 400 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 INTS10Q9NVR2 710 aaKnown RBP17.28■□□□□ 0.36
CHGA-202ENST00000334654 RAB23Q9ULC3 237 aa17.28■□□□□ 0.36
CHGA-202ENST00000334654 PRSS38A1L453 326 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 MAGEC1O60732 1142 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 NDUFS3O75489 264 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 IVLP07476 585 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 H2AFXP16104 143 aaPredicted RBP17.27■□□□□ 0.36
CHGA-202ENST00000334654 MSH3P20585 1137 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 KELP23276 732 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 RPS3P23396 243 aaKnown RBP eCLIP17.27■□□□□ 0.36
CHGA-202ENST00000334654 HTR1BP28222 390 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 GCAP28676 217 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 AKT1P31749 480 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 MPLP40238 635 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 NSG1P42857 185 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 ADARP55265 1226 aaKnown RBP17.27■□□□□ 0.36
CHGA-202ENST00000334654 PTK2BQ14289 1009 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 TEAD4Q15561 434 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 CCDC6Q16204 474 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 KIF19Q2TAC6 998 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 C11orf96Q7Z7L8 435 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 PPM1NQ8N819 430 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 CEP76Q8TAP6 659 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 HEXDCQ8WVB3 486 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 PDXPQ96GD0 296 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 TTC1Q99614 292 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 SMOC1Q9H4F8 434 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 FSCN3Q9NQT6 498 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 SUFUQ9UMX1 484 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 CRYL1Q9Y2S2 319 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 SNX11Q9Y5W9 270 aa17.27■□□□□ 0.36
CHGA-202ENST00000334654 ZFC3H1O60293 1989 aaKnown RBP17.27■□□□□ 0.35
CHGA-202ENST00000334654 PRMT5O14744 637 aaPredicted RBP17.26■□□□□ 0.35
CHGA-202ENST00000334654 FAM155BO75949 473 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 SHBGP04278 402 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 RETP07949 1114 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 ZNF7P17097 686 aaPredicted RBP17.26■□□□□ 0.35
CHGA-202ENST00000334654 PPARGP37231 505 aaPredicted RBP17.26■□□□□ 0.35
CHGA-202ENST00000334654 ABCG1P45844 678 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 SRP54P61011 504 aaKnown RBP17.26■□□□□ 0.35
CHGA-202ENST00000334654 PYCR3Q53H96 274 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 CTSL3PQ5NE16 218 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 RNF187Q5TA31 235 aaPredicted RBP17.26■□□□□ 0.35
CHGA-202ENST00000334654 TMEM220Q6QAJ8 160 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 DET1Q7L5Y6 550 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 RABEPKQ7Z6M1 372 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 STRA8Q7Z7C7 330 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 ZC3HC1Q86WB0 502 aaKnown RBP17.26■□□□□ 0.35
CHGA-202ENST00000334654 LRRC6Q86X45 466 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 CDKL2Q92772 493 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 DCUN1D1Q96GG9 259 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 TCEAL2Q9H3H9 227 aaPredicted RBP17.26■□□□□ 0.35
CHGA-202ENST00000334654 KLQ9UEF7 1012 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 MED16Q9Y2X0 877 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 ST14Q9Y5Y6 855 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 DGKBQ9Y6T7 804 aa17.26■□□□□ 0.35
CHGA-202ENST00000334654 OR2AG2A6NM03 316 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 GPR89AB7ZAQ6 455 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 CFAP99D6REC4 459 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 ERLIN1O75477 346 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 GPR89BP0CG08 455 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 C21orf59P57076 290 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 IRX4P78413 519 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 NAB1Q13506 487 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 ZNF658BQ4V348 819 aaPredicted RBP17.25■□□□□ 0.35
CHGA-202ENST00000334654 BCL7AQ4VC05 210 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 ZNF542PQ5EBM4 170 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 TRIM61Q5EBN2 209 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 PRAMEF14Q5SWL7 426 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 XKR5Q6UX68 686 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 PARGQ86W56 976 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 CTAGE3PQ8IX95 158 aa17.25■□□□□ 0.35
CHGA-202ENST00000334654 GABPB2Q8TAK5 448 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms