RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TLDC1Q6P9B6 456 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 TRIM74Q86UV6 250 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 TRIM73Q86UV7 250 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 UMODL1-AS1Q8N2C9 162 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 ZNF781Q8N8C0 355 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 FIG4Q92562 907 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 SLCO2A1Q92959 643 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 NDEL1Q9GZM8 345 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 RETREG1Q9H6L5 497 aa11.71□□□□□ -0.53
HDAC6-201ENST00000334136 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-201ENST00000334136 CXorf49A8MYA2 514 aaPredicted RBP11.71□□□□□ -0.54
HDAC6-201ENST00000334136 ZNF487B1APH4 448 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 C5orf67F2Z3F1 127 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 KDELR3O43731 214 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 RBP1P09455 135 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 LPOP22079 712 aaPredicted RBP11.71□□□□□ -0.54
HDAC6-201ENST00000334136 DNAJB1P25685 340 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 CDH13P55290 713 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 HYAL1Q12794 435 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 PLCL1Q15111 1095 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 PRKD1Q15139 912 aaPredicted RBP11.71□□□□□ -0.54
HDAC6-201ENST00000334136 TANGO2Q6ICL3 276 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 TRNP1Q6NT89 227 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 GK5Q6ZS86 529 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 ACMSDQ8TDX5 336 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 FOPNLQ96NB1 174 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 CDH19Q9H159 772 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 PLGRKTQ9HBL7 147 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 RIC8BQ9NVN3 520 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 FAM95CA0A1B0GW59 222 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 C9JVG2 144 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 OR6B1O95007 311 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 ELFN1P0C7U0 828 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 THOP1P52888 689 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 NR1D2Q14995 579 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 RD3Q7Z3Z2 195 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 OR2AP1Q8NGE2 309 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 OR14C36Q8NHC7 312 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 FAM210AQ96ND0 272 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 BPIFA1Q9NP55 256 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 SELENONQ9NZV5 590 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 RAP2CQ9Y3L5 183 aa11.71□□□□□ -0.54
HDAC6-201ENST00000334136 AGRPO00253 132 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 TRIM38O00635 465 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 PLIN3O60664 434 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 PRAMEF12O95522 483 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ARSAP15289 507 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 NR4A1P22736 598 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 GRIA1P42261 906 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 POTEHQ6S545 545 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 TREML1Q86YW5 311 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 FEM1CQ96JP0 617 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ARID2Q68CP9 1835 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 BRWD1Q9NSI6 2320 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 PRAMEF11O60813 436 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 LAMP2P13473 410 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 TTLL9Q3SXZ7 439 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 SCIMPQ6UWF3 145 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ZNF783Q6ZMS7 281 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 SKA1Q96BD8 255 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 MIPEPQ99797 713 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 MYOCQ99972 504 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 HERPUD2Q9BSE4 406 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 BDH2Q9BUT1 245 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 C9orf16Q9BUW7 83 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 MIR1-1HGQ9H1L0 117 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 EPB41L4BQ9H329 900 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ALG9Q9H6U8 611 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 C8orf33Q9H7E9 229 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-201ENST00000334136 CCL26Q9Y258 94 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 SYNDIG1LA6NDD5 238 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 MAN2B1O00754 1011 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ITM2AO43736 263 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 WDR47O94967 919 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 SNRPB2P08579 225 aaKnown RBP11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ATXN8OSP0DMR3 200 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 HOXB2P14652 356 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 CDH2P19022 906 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-201ENST00000334136 MSH3P20585 1137 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 GRIA2P42262 883 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ELP6Q0PNE2 266 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ARL13AQ5H913 290 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-201ENST00000334136 LDLRAP1Q5SW96 308 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 CERCAMQ5T4B2 595 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 TMEM198Q66K66 360 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 NEPROQ6NW34 567 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ARFGAP1Q8N6T3 406 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 DCAKDQ8WVC6 231 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC6-201ENST00000334136 SLC39A13Q96H72 371 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ZCCHC2Q9C0B9 1178 aaKnown RBP11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ASB8Q9H765 288 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 CLK4Q9HAZ1 481 aaKnown RBP11.7□□□□□ -0.54
HDAC6-201ENST00000334136 SPAG4Q9NPE6 437 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 IGSF9Q9P2J2 1179 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 CA14Q9ULX7 337 aa11.7□□□□□ -0.54
HDAC6-201ENST00000334136 PRPF19Q9UMS4 504 aaKnown RBP11.7□□□□□ -0.54
HDAC6-201ENST00000334136 RBMX2Q9Y388 322 aaKnown RBP11.7□□□□□ -0.54
HDAC6-201ENST00000334136 ATG13O75143 517 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 ZNF682O95780 498 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms