RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 MROH9Q5TGP6 573 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 ARMC3Q5W041 872 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 ERAP2Q6P179 960 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 TRMT10BQ6PF06 316 aaKnown RBP13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 PACS1Q6VY07 963 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 LCA5Q86VQ0 697 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 TRIM69Q86WT6 500 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 HORMAD1Q86X24 394 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 SYT12Q8IV01 421 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 DNASE2BQ8WZ79 361 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 IFT43Q96FT9 208 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 NAF1Q96HR8 494 aaKnown RBP13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 SMIM14Q96QK8 99 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 TRIB3Q96RU7 358 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 ADGRE3Q9BY15 652 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 SLC13A1Q9BZW2 595 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 C12orf65Q9H3J6 166 aaKnown RBP13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 LRRC40Q9H9A6 602 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 PCMTD2Q9NV79 361 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 TAS2R1Q9NYW7 299 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 TXNDC16Q9P2K2 825 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 TAGLN3Q9UI15 199 aa13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 ZFR2Q9UPR6 939 aaKnown RBP13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 AAR2Q9Y312 384 aaKnown RBP13.36□□□□□ -0.27
TUBB2A-201ENST00000333628 CACNA1EQ15878 2313 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 TP53BP1Q12888 1972 aaPredicted RBP13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 FAM237BA0A1B0GVD1 139 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 IGLON5A6NGN9 336 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 MEI4A8MW99 385 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 ANKRD66B4E2M5 251 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 LATO43561 262 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 MMP20O60882 483 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 H2AFYO75367 372 aaKnown RBP13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 KLHL2O95198 593 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 RPSAP08865 295 aaKnown RBP13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 ALPIP09923 528 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 ACADSP16219 412 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 HNF1BP35680 557 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 GP5P40197 560 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 GEMP55040 296 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 RPS21P63220 83 aaKnown RBP13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 IRX4P78413 519 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 MPP3Q13368 585 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 TAF11Q15544 211 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 ZNF284Q2VY69 593 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 WDR45BQ5MNZ6 344 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 SEL1L3Q68CR1 1132 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 RGL4Q8IZJ4 473 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 LPCAT1Q8NF37 534 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 PIWIL2Q8TC59 973 aaKnown RBP13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 SREK1Q8WXA9 508 aaKnown RBP13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 SNX19Q92543 992 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 KLK6Q92876 244 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 RMDN1Q96DB5 314 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 MRGPRX2Q96LB1 330 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 WRAP53Q9BUR4 548 aaKnown RBP13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 MLPHQ9BV36 600 aaPredicted RBP13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 NSMCE4AQ9NXX6 385 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 EIF2B4Q9UI10 523 aaKnown RBP13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 MID2Q9UJV3 735 aa13.35□□□□□ -0.27
TUBB2A-201ENST00000333628 KNL1Q8NG31 2342 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 PCDH15Q96QU1 1955 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 A0A0J9YYE9 177 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 LOC285095A0A1B0GVY8 99 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 A0A1W2PPC4 97 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 PLIN3O60664 434 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 PAK4O96013 591 aaPredicted RBP13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 EPOP01588 193 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 TRBC1P01850 177 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 SERPINE1P05121 402 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 ALOX15P16050 662 aaPredicted RBP13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 GM2AP17900 193 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 ATP6V1C1P21283 382 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 CD27P26842 260 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 MMP12P39900 470 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 MAGEA12P43365 314 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 RALGDSQ12967 914 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 GALNT3Q14435 633 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 TRMT5Q32P41 509 aaKnown RBP13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 TMEM259Q4ZIN3 620 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 FASTKD1Q53R41 847 aaKnown RBP13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 TRIM61Q5EBN2 209 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 PEAR1Q5VY43 1037 aaPredicted RBP13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 KIAA1161Q6NSJ0 714 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 CASC4Q6P4E1 433 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 DPPA4Q7L190 304 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 NET1Q7Z628 596 aaPredicted RBP13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 LMNTD2Q8IXW0 634 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 MPP5Q8N3R9 675 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 PDCD7Q8N8D1 485 aaKnown RBP13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 GPATCH11Q8N954 259 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 IPMKQ8NFU5 416 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 PPP1R14CQ8TAE6 165 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 CXorf40AQ8TE69 158 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 PPP4R1Q8TF05 950 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 STON2Q8WXE9 905 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 STMN2Q93045 179 aa13.34□□□□□ -0.27
TUBB2A-201ENST00000333628 MIEF2Q96C03 454 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms