RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PRMT9Q6P2P2 845 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 ZNF598Q86UK7 904 aaKnown RBP12.21□□□□□ -0.46
VPS33B-201ENST00000333371 DHRSXQ8N5I4 330 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 MDGA1Q8NFP4 955 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 RHEBL1Q8TAI7 183 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 STAG3L4Q8TBR4 150 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 BRSK1Q8TDC3 778 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 SEPT8Q92599 483 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.21□□□□□ -0.46
VPS33B-201ENST00000333371 BIRC7Q96CA5 298 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 RMDN1Q96DB5 314 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 COG8Q96MW5 612 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 HGH1Q9BTY7 390 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 AIG1Q9NVV5 245 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 MARCH2Q9P0N8 246 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 ANAPC2Q9UJX6 822 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 PLXNA3P51805 1871 aa12.21□□□□□ -0.46
VPS33B-201ENST00000333371 TCF3P15923 654 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 TYMPP19971 482 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 RPS9P46781 194 aaKnown RBP12.2□□□□□ -0.46
VPS33B-201ENST00000333371 OR1G1P47890 313 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 HTR6P50406 440 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 POLR2JP52435 117 aaKnown RBP12.2□□□□□ -0.46
VPS33B-201ENST00000333371 IST1P53990 364 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 IL10RBQ08334 325 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 PPP1R8Q12972 351 aaKnown RBP12.2□□□□□ -0.46
VPS33B-201ENST00000333371 AARS2Q5JTZ9 985 aaKnown RBP12.2□□□□□ -0.46
VPS33B-201ENST00000333371 ANKRD34AQ69YU3 496 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 KCTD8Q6ZWB6 473 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 PACRGLQ8N7B6 248 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 EEF1AKMT1Q8WVE0 214 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 HHIPL1Q96JK4 782 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 FAM193BQ96PV7 902 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-201ENST00000333371 SEZ6LQ9BYH1 1024 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 CCSER2Q9H7U1 834 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 SMPD3Q9NY59 655 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-201ENST00000333371 SRRDQ9UH36 339 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 CHD5Q8TDI0 1954 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 THSD7BQ9C0I4 1608 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 PIKFYVEQ9Y2I7 2098 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 IGLV3-10A0A075B6K4 115 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 TRIM64CA6NLI5 447 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 SLC22A3O75751 556 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 FGF1P05230 155 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 RPS17P08708 135 aaKnown RBP12.2□□□□□ -0.46
VPS33B-201ENST00000333371 PBX3P40426 434 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 DGKQP52824 942 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 TAF10Q12962 218 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 TMTC4Q5T4D3 741 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 SLC24A5Q71RS6 500 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 FNDC5Q8NAU1 212 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 GPR150Q8NGU9 434 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 FBXO32Q969P5 355 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 CCDC97Q96F63 343 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-201ENST00000333371 ZNF599Q96NL3 588 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 PLEKHG4BQ96PX9 1271 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 SPON2Q9BUD6 331 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 CHID1Q9BWS9 393 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 OSBPL6Q9BZF3 934 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 CRISPLD1Q9H336 500 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 TAS2R13Q9NYV9 303 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 PCTPQ9UKL6 214 aa12.2□□□□□ -0.46
VPS33B-201ENST00000333371 H0Y858 1186 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 SNX2O60749 519 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 EOMESO95936 686 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 PRR35P0CG20 571 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 HLA-DPA1P20036 260 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 CAPGP40121 348 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 ITIH5Q86UX2 942 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 TMEM199Q8N511 208 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 FAM86B1Q8N7N1 296 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 ATP6V0D2Q8N8Y2 350 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 PROKR1Q8TCW9 393 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 CD99L2Q8TCZ2 262 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 BTN2A3PQ96KV6 586 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 MUS81Q96NY9 551 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 BIRC8Q96P09 236 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 ASB2Q96Q27 587 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 TRIM54Q9BYV2 358 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 CCDC68Q9H2F9 335 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 TLR9Q9NR96 1032 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 SYNCRIPO60506 623 aaKnown RBP12.19□□□□□ -0.46
VPS33B-201ENST00000333371 PRAMEF11O60813 436 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 NDUFS3O75489 264 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 RSL1D1O76021 490 aaKnown RBP12.19□□□□□ -0.46
VPS33B-201ENST00000333371 GPIP06744 558 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 SERPINF2P08697 491 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 BMP1P13497 986 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 SHMT2P34897 504 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 RAD51Q06609 339 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 BNIP3Q12983 259 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 TYSND1Q2T9J0 566 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 C6orf136Q5SQH8 315 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 IRAK1BP1Q5VVH5 260 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 ABRAXAS1Q6UWZ7 409 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 Q6ZSR9 355 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 GLT6D1Q7Z4J2 308 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 HS3ST5Q8IZT8 346 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 LGI2Q8N0V4 545 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms