RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 KLK8O60259 260 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 FKTNO75072 461 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 CLIC3O95833 236 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 PYGLP06737 847 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 TACR2P21452 398 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 ADARP55265 1226 aaKnown RBP15.22■□□□□ 0.03
BRCC3-201ENST00000330045 NUP107P57740 925 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 EEFSECP57772 596 aaKnown RBP15.22■□□□□ 0.03
BRCC3-201ENST00000330045 DSC1Q08554 894 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 RBBP7Q16576 425 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 PTPRNQ16849 979 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 VARS2Q5ST30 1063 aaKnown RBP15.22■□□□□ 0.03
BRCC3-201ENST00000330045 UGT3A1Q6NUS8 523 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 KIAA2013Q8IYS2 634 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 CFAP52Q8N1V2 620 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 DHRSXQ8N5I4 330 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 PAPD5Q8NDF8 572 aaKnown RBP15.22■□□□□ 0.03
BRCC3-201ENST00000330045 ISOC1Q96CN7 298 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 FBXL20Q96IG2 436 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 TMEM74Q96NL1 305 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 MGME1Q9BQP7 344 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 PFDN4Q9NQP4 134 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 SLAMF8Q9P0V8 285 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 FADS3Q9Y5Q0 445 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 GBF1Q92538 1859 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 A0A0J9YVX5 310 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 CES1P23141 567 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 ERVK-8P63133 956 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 RING1Q06587 406 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 CTXN3Q4LDR2 81 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 PDCD4Q53EL6 469 aaKnown RBP15.22■□□□□ 0.03
BRCC3-201ENST00000330045 NANOGP8Q6NSW7 305 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 LGI2Q8N0V4 545 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 MDGA1Q8NFP4 955 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 OR56A4Q8NGH8 313 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 ACOX2Q99424 681 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 SLC30A3Q99726 388 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 C1orf50Q9BV19 199 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 NANOGQ9H9S0 305 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 SMPD3Q9NY59 655 aaPredicted RBP15.22■□□□□ 0.03
BRCC3-201ENST00000330045 EBF1Q9UH73 591 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 SUN2Q9UH99 717 aa15.22■□□□□ 0.03
BRCC3-201ENST00000330045 hCG_2014768A0A024R1R8 64 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 F5H5T6 163 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 TMEM189-UBE2V1I3L0A0 370 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 SNAP91O60641 907 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 C1RP00736 705 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 HOXD9P28356 352 aaPredicted RBP15.21■□□□□ 0.03
BRCC3-201ENST00000330045 CAPGP40121 348 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 CDKN1CP49918 316 aaPredicted RBP15.21■□□□□ 0.03
BRCC3-201ENST00000330045 TAF1AQ15573 450 aaPredicted RBP15.21■□□□□ 0.03
BRCC3-201ENST00000330045 ABRAXAS1Q6UWZ7 409 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 COLGALT2Q8IYK4 626 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 OR2T11Q8NH01 316 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 MAGEE2Q8TD90 523 aaPredicted RBP15.21■□□□□ 0.03
BRCC3-201ENST00000330045 ESAMQ96AP7 390 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 NSMCE3Q96MG7 304 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 SEPT3Q9UH03 358 aa15.21■□□□□ 0.03
BRCC3-201ENST00000330045 ZFC3H1O60293 1989 aaKnown RBP15.21■□□□□ 0.03
BRCC3-201ENST00000330045 C2orf81A6NN90 581 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 ZNF701M0R085 212 aaPredicted RBP15.21■□□□□ 0.02
BRCC3-201ENST00000330045 VPS26AO75436 327 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 LDLRP01130 860 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 RPS9P46781 194 aaKnown RBP15.21■□□□□ 0.02
BRCC3-201ENST00000330045 SCNN1BP51168 640 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 ARPP19P56211 112 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 GPNMBQ14956 572 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 TCTN1Q2MV58 587 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 TIGD2Q4W5G0 525 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 FAM26DQ5JW98 314 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 PATL1Q86TB9 770 aaKnown RBP15.21■□□□□ 0.02
BRCC3-201ENST00000330045 GPR180Q86V85 440 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 PROSER1Q86XN7 944 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.02
BRCC3-201ENST00000330045 OFCC1Q8IZS5 231 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 TET1Q8NFU7 2136 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 OR7D4Q8NG98 312 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 C12orf43Q96C57 262 aaKnown RBP15.21■□□□□ 0.02
BRCC3-201ENST00000330045 CINPQ9BW66 212 aaPredicted RBP15.21■□□□□ 0.02
BRCC3-201ENST00000330045 NPLQ9BXD5 320 aaPredicted RBP15.21■□□□□ 0.02
BRCC3-201ENST00000330045 INTS7Q9NVH2 962 aaKnown RBP15.21■□□□□ 0.02
BRCC3-201ENST00000330045 RIC8BQ9NVN3 520 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 ZIM2Q9NZV7 527 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 HCSTQ9UBK5 93 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 SLC27A5Q9Y2P5 690 aa15.21■□□□□ 0.02
BRCC3-201ENST00000330045 CHD5Q8TDI0 1954 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 FAM234BA2RU67 622 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 PFDN1O60925 122 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 PKMP14618 531 aaKnown RBP15.2■□□□□ 0.02
BRCC3-201ENST00000330045 HTR1EP28566 365 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 IL12AP29459 219 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 RGRP47804 291 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 GALK1P51570 392 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 GNA12Q03113 381 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 EMX2Q04743 252 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 CYBRD1Q53TN4 286 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 CLLU1OSQ5K130 101 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 C6orf136Q5SQH8 315 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 DHRS4L2Q6PKH6 230 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 GPRIN3Q6ZVF9 776 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms