RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 TCEAL6Q6IPX3 200 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 PSAPL1Q6NUJ1 521 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 PACS1Q6VY07 963 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 KDM7AQ6ZMT4 941 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 KIAA0408Q6ZU52 694 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 C3orf62Q6ZUJ4 267 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 CYS1Q717R9 158 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 MARK2Q7KZI7 788 aaKnown RBP13.92□□□□□ -0.18
CMTM1-201ENST00000328020 ADGRG6Q86SQ4 1221 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 LRRTM4Q86VH4 590 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 TRAPPC5Q8IUR0 188 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 IGDCC3Q8IVU1 814 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 MINDY1Q8N5J2 469 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 OR1E3Q8WZA6 343 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 TCEAL3Q969E4 200 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 TSACCQ96A04 125 aaPredicted RBP13.92□□□□□ -0.18
CMTM1-201ENST00000328020 SCARF2Q96GP6 870 aaPredicted RBP13.92□□□□□ -0.18
CMTM1-201ENST00000328020 OR2M4Q96R27 311 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 EDEM2Q9BV94 578 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 GSDMCQ9BYG8 508 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 CLPBQ9H078 707 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 FGF22Q9HCT0 170 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 INTS10Q9NVR2 710 aaKnown RBP13.92□□□□□ -0.18
CMTM1-201ENST00000328020 TRNAU1APQ9NX07 287 aaKnown RBP13.92□□□□□ -0.18
CMTM1-201ENST00000328020 ZFATQ9P243 1243 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 SUFUQ9UMX1 484 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 GPR34Q9UPC5 381 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 DOLKQ9UPQ8 538 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 GPSM3Q9Y4H4 160 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 DNMT3AQ9Y6K1 912 aaPredicted RBP13.92□□□□□ -0.18
CMTM1-201ENST00000328020 OAS3Q9Y6K5 1087 aaKnown RBP13.92□□□□□ -0.18
CMTM1-201ENST00000328020 LAMA1P25391 3075 aa13.92□□□□□ -0.18
CMTM1-201ENST00000328020 IGLV3-16A0A075B6K0 115 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 H3BMM5 538 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 OR56A5P0C7T3 313 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 ALPPL2P10696 532 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 ZNF8P17098 575 aaPredicted RBP13.91□□□□□ -0.18
CMTM1-201ENST00000328020 ARNTP27540 789 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 POLD2P49005 469 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 BNC1Q01954 994 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 MGAT5Q09328 741 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 SLC14A1Q13336 389 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 FASTKD3Q14CZ7 662 aaKnown RBP13.91□□□□□ -0.18
CMTM1-201ENST00000328020 HSP90AA5PQ58FG0 334 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 PRRT3Q5FWE3 981 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 TPRG1LQ5T0D9 272 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 GKN2Q86XP6 184 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 CILP2Q8IUL8 1156 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 PIANPQ8IYJ0 282 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 FAM122AQ96E09 287 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 PDXPQ96GD0 296 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 C9orf72Q96LT7 481 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 CCDC68Q9H2F9 335 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 ANKZF1Q9H8Y5 726 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 ARFGAP3Q9NP61 516 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 DNAAF2Q9NVR5 837 aaKnown RBP13.91□□□□□ -0.18
CMTM1-201ENST00000328020 TXNDC16Q9P2K2 825 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 TMPRSS11EQ9UL52 423 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 PCDHB1Q9Y5F3 818 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 PCDHGB2Q9Y5G2 931 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 CSNK1G3Q9Y6M4 447 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 ADAMTS9Q9P2N4 1935 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 PIKFYVEQ9Y2I7 2098 aa13.91□□□□□ -0.18
CMTM1-201ENST00000328020 BPTFQ12830 3046 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 PLXNB3Q9ULL4 1909 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 GOLGA8KD6RF30 607 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 GOLGA8TH3BQL2 631 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 PRMT5O14744 637 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-201ENST00000328020 CHUKO15111 745 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 GPR39O43194 453 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 PCDHGA12O60330 932 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 MTX2O75431 263 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 PIAS2O75928 621 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 FTH1P02794 183 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 ERVK-10P10266 1014 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 EPHA8P29322 1005 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-201ENST00000328020 ECHS1P30084 290 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 CDKN1CP49918 316 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-201ENST00000328020 TYSND1Q2T9J0 566 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 BCL7AQ4VC05 210 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 PYCR3Q53H96 274 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 ZNF542PQ5EBM4 170 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 WDR93Q6P2C0 686 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 TMEM220Q6QAJ8 160 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 CCNI2Q6ZMN8 369 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-201ENST00000328020 TRMT10CQ7L0Y3 403 aaKnown RBP13.9□□□□□ -0.18
CMTM1-201ENST00000328020 DCLK2Q8N568 766 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 RASGEF1AQ8N9B8 481 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 LMX1AQ8TE12 382 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 TRIM56Q9BRZ2 755 aaKnown RBP13.9□□□□□ -0.18
CMTM1-201ENST00000328020 TIMM29Q9BSF4 260 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 PARD6AQ9NPB6 346 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 MRPL40Q9NQ50 206 aaKnown RBP13.9□□□□□ -0.18
CMTM1-201ENST00000328020 FSCN3Q9NQT6 498 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 TM7SF3Q9NS93 570 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 IARS2Q9NSE4 1012 aaKnown RBP13.9□□□□□ -0.18
CMTM1-201ENST00000328020 GNPTGQ9UJJ9 305 aa13.9□□□□□ -0.18
CMTM1-201ENST00000328020 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.9□□□□□ -0.18
CMTM1-201ENST00000328020 GOLGA4Q13439 2230 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms