RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 SMPD3Q9NY59 655 aaPredicted RBP19.7■□□□□ 0.74
SOX2-201ENST00000325404 COMMD10Q9Y6G5 202 aa19.7■□□□□ 0.74
SOX2-201ENST00000325404 CCDC154A6NI56 674 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 TBX18O95935 607 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 GNAO1P09471 354 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 CHRM3P20309 590 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 FMO4P31512 558 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 POLR2JP52435 117 aaKnown RBP19.69■□□□□ 0.74
SOX2-201ENST00000325404 SYVN1Q86TM6 617 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 DHRSXQ8N5I4 330 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 SPATA17Q96L03 361 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 DEFB118Q96PH6 123 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 PLEKHG4BQ96PX9 1271 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 ELAC1Q9H777 363 aaKnown RBP19.69■□□□□ 0.74
SOX2-201ENST00000325404 PAK6Q9NQU5 681 aaPredicted RBP19.69■□□□□ 0.74
SOX2-201ENST00000325404 ZNHIT2Q9UHR6 403 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 TTC3P53804 2025 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 UBA6A0AVT1 1052 aaPredicted RBP19.69■□□□□ 0.74
SOX2-201ENST00000325404 OR6C75A6NL08 312 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 IFRD1O00458 451 aaPredicted RBP19.69■□□□□ 0.74
SOX2-201ENST00000325404 PITPNM1O00562 1244 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 INPP4BO15327 924 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 CLOCKO15516 846 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 GJB3O75712 270 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 CLCN4P51793 760 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 NADSYN1Q6IA69 706 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 USP51Q70EK9 711 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 GPR180Q86V85 440 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 MIB1Q86YT6 1006 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 ABI1Q8IZP0 508 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 PNPT1Q8TCS8 783 aaKnown RBP19.69■□□□□ 0.74
SOX2-201ENST00000325404 PPP1R14BQ96C90 147 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 CNDP2Q96KP4 475 aaKnown RBP19.69■□□□□ 0.74
SOX2-201ENST00000325404 ZNF382Q96SR6 550 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 DOK1Q99704 481 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 SUN2Q9UH99 717 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 IKZF3Q9UKT9 509 aa19.69■□□□□ 0.74
SOX2-201ENST00000325404 PRG3Q9Y2Y8 225 aaPredicted RBP19.69■□□□□ 0.74
SOX2-201ENST00000325404 A0A1B0GTL3 188 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 C2orf81A6NN90 581 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 H0YAE9 185 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 VPS26AO75436 327 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 LDLRP01130 860 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 HOXD9P28356 352 aaPredicted RBP19.68■□□□□ 0.74
SOX2-201ENST00000325404 CDH15P55291 814 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 MRPL58Q14197 206 aaKnown RBP19.68■□□□□ 0.74
SOX2-201ENST00000325404 ISOC1Q96CN7 298 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 HGH1Q9BTY7 390 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 HIPK3Q9H422 1215 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 FADS3Q9Y5Q0 445 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 FAM149AA5PLN7 773 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 CDC7O00311 574 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 ENPP3O14638 875 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 ZDHHC11BP0C7U3 371 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 PKMP14618 531 aaKnown RBP19.68■□□□□ 0.74
SOX2-201ENST00000325404 UGT1A6P19224 532 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 GPNMBQ14956 572 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 PAGE3Q5JUK9 113 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 VARS2Q5ST30 1063 aaKnown RBP19.68■□□□□ 0.74
SOX2-201ENST00000325404 CIR1Q86X95 450 aaPredicted RBP19.68■□□□□ 0.74
SOX2-201ENST00000325404 KIAA2013Q8IYS2 634 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 DNAJB14Q8TBM8 379 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 ISG20Q96AZ6 181 aaKnown RBP19.68■□□□□ 0.74
SOX2-201ENST00000325404 GPR21Q99679 349 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 LRRC3Q9BY71 257 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 PREBQ9HCU5 417 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 GALNT8Q9NY28 637 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 ZNF225Q9UK10 706 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 FAM50BQ9Y247 325 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 PCDHB7Q9Y5E2 793 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 SPO11Q9Y5K1 396 aa19.68■□□□□ 0.74
SOX2-201ENST00000325404 F5H5T6 163 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 GIPC1O14908 333 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 TSPAN12O95859 305 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 RPS9P46781 194 aaKnown RBP19.67■□□□□ 0.74
SOX2-201ENST00000325404 TTPAP49638 278 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 TAF10Q12962 218 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 CYBRD1Q53TN4 286 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 GPRIN3Q6ZVF9 776 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 HID1Q8IV36 788 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 OR4K2Q8NGD2 314 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 NPLQ9BXD5 320 aaPredicted RBP19.67■□□□□ 0.74
SOX2-201ENST00000325404 HEBP1Q9NRV9 189 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 TIMM22Q9Y584 194 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 GBF1Q92538 1859 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 ARNTLO00327 626 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 PQBP1O60828 265 aaKnown RBP19.67■□□□□ 0.74
SOX2-201ENST00000325404 CR2P20023 1033 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 ADARP55265 1226 aaKnown RBP19.67■□□□□ 0.74
SOX2-201ENST00000325404 YBX1P67809 324 aaKnown RBP19.67■□□□□ 0.74
SOX2-201ENST00000325404 GNA12Q03113 381 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 RABL3Q5HYI8 236 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 NANOGP8Q6NSW7 305 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 GLT6D1Q7Z4J2 308 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 ZFAND4Q86XD8 727 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 BPIFB1Q8TDL5 484 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 VPS33AQ96AX1 596 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 TEX37Q96LM6 180 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 TUBA1CQ9BQE3 449 aa19.67■□□□□ 0.74
SOX2-201ENST00000325404 BDH2Q9BUT1 245 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms