RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 EPHX1P07099 455 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 NCF1P14598 390 aaPredicted RBP18.21■□□□□ 0.51
USP39-201ENST00000323701 GTF2A1P52655 376 aaPredicted RBP18.21■□□□□ 0.51
USP39-201ENST00000323701 PTPN5P54829 565 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 ZBTB16Q05516 673 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 ELAVL3Q14576 367 aaKnown RBP18.21■□□□□ 0.51
USP39-201ENST00000323701 UNC50Q53HI1 259 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 ZNF678Q5SXM1 525 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 TXNDC11Q6PKC3 985 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 TECPR1Q7Z6L1 1165 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 CACUL1Q86Y37 369 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 NSUN5Q96P11 429 aaKnown RBP18.21■□□□□ 0.51
USP39-201ENST00000323701 FAM83DQ9H4H8 585 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 ARL8BQ9NVJ2 186 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 PKD2L2Q9NZM6 624 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 HAO1Q9UJM8 370 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 COMMD10Q9Y6G5 202 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 LRRK1Q38SD2 2015 aa18.21■□□□□ 0.51
USP39-201ENST00000323701 TICRRQ7Z2Z1 1910 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 H3BQ06 376 aaPredicted RBP18.2■□□□□ 0.5
USP39-201ENST00000323701 MATN2O00339 956 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 NPHS1O60500 1241 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 KERAO60938 352 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 PRNPP04156 253 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 IMPDH1P20839 514 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 XPAP23025 273 aaPredicted RBP18.2■□□□□ 0.5
USP39-201ENST00000323701 SKIV2L2P42285 1042 aaKnown RBP18.2■□□□□ 0.5
USP39-201ENST00000323701 RPL14P50914 215 aaKnown RBP18.2■□□□□ 0.5
USP39-201ENST00000323701 CDH13P55290 713 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 CFAP157Q5JU67 520 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 GPRC6AQ5T6X5 926 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 MACC1Q6ZN28 852 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 DET1Q7L5Y6 550 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 NKAPQ8N5F7 415 aaKnown RBP18.2■□□□□ 0.5
USP39-201ENST00000323701 GBP7Q8N8V2 638 aaPredicted RBP18.2■□□□□ 0.5
USP39-201ENST00000323701 TMIEQ8NEW7 156 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 OR8D1Q8WZ84 308 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 RILPQ96NA2 401 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 WWP1Q9H0M0 922 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 ZDHHC3Q9NYG2 299 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 GNPTGQ9UJJ9 305 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 RNF112Q9ULX5 631 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 PLXNA2O75051 1894 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 IGLV3-16A0A075B6K0 115 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 DIAPH2O60879 1101 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 ITGB7P26010 798 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 GRIA2P42262 883 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 GALK1P51570 392 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 NFKB2Q00653 900 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 HTR4Q13639 388 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 ACSBG2Q5FVE4 666 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 HENMT1Q5T8I9 393 aaKnown RBP18.2■□□□□ 0.5
USP39-201ENST00000323701 EPGNQ6UW88 154 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 FRMD7Q6ZUT3 714 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 TREML1Q86YW5 311 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 KIF2BQ8N4N8 673 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 STAG3L4Q8TBR4 150 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 COPS8Q99627 209 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 WDR55Q9H6Y2 383 aaPredicted RBP18.2■□□□□ 0.5
USP39-201ENST00000323701 ASB1Q9Y576 335 aa18.2■□□□□ 0.5
USP39-201ENST00000323701 A0A1B0GTL3 188 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 MTHFRP42898 656 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 AGTR2P50052 363 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 ALDH18A1P54886 795 aaKnown RBP18.19■□□□□ 0.5
USP39-201ENST00000323701 ATP6V0D1P61421 351 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 HERVK_113P63132 956 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 COL19A1Q14993 1142 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 AAK1Q2M2I8 961 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 HCAR2Q8TDS4 363 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 SUSD6Q92537 303 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 ESAMQ96AP7 390 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 L3HYPDHQ96EM0 354 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 OR52B2Q96RD2 323 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 ERVK-6Q9BXR3 956 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 UTP6Q9NYH9 597 aaKnown RBP18.19■□□□□ 0.5
USP39-201ENST00000323701 SUN2Q9UH99 717 aa18.19■□□□□ 0.5
USP39-201ENST00000323701 GOLGA8QA0A0J9YX86 632 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 CCDC189A1A4V9 331 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 GOLGA8OA6NCC3 632 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 SUPT3HB4E1H0 165 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 GOLGA8NF8WBI6 632 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 SUPT3HO75486 399 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 SUPT7LO94864 414 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 UNC5CO95185 931 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 ELFN1P0C7U0 828 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 TPBGLP0DKB5 382 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 IGFBP4P22692 258 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 HNRNPH1P31943 449 aaKnown RBP18.18■□□□□ 0.5
USP39-201ENST00000323701 PPARGP37231 505 aaPredicted RBP18.18■□□□□ 0.5
USP39-201ENST00000323701 NSG1P42857 185 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 PRKAA1Q13131 559 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 UBAP2LQ14157 1087 aaKnown RBP18.18■□□□□ 0.5
USP39-201ENST00000323701 SH2D4BQ5SQS7 431 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 LYPLAL1Q5VWZ2 237 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 SLC22A9Q8IVM8 553 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 CCDC126Q96EE4 140 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 CNDP1Q96KN2 507 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 FAM161BQ96MY7 647 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 TTC1Q99614 292 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 NUF2Q9BZD4 464 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms