RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PITRM1Q5JRX3 1037 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 CHERPQ8IWX8 916 aaKnown RBP22.13■■□□□ 1.13
PNKP-201ENST00000322344 CARNMT1Q8N4J0 409 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 NAT14Q8WUY8 206 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 WBP2Q969T9 261 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 PPWD1Q96BP3 646 aaKnown RBP22.13■■□□□ 1.13
PNKP-201ENST00000322344 LRCH3Q96II8 777 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 VN1R3Q9BXE9 311 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 CMTM6Q9NX76 183 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 ZIM2Q9NZV7 527 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 DHRS7Q9Y394 339 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 TNPO3Q9Y5L0 923 aaKnown RBP22.13■■□□□ 1.13
PNKP-201ENST00000322344 C2orf78A6NCI8 922 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 E2F3O00716 465 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 TBL1XO60907 577 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 CLCN7P51798 805 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 AP1S1P61966 158 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 ADRM1Q16186 407 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 HMBOX1Q6NT76 420 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 CHCHD4Q8N4Q1 142 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 DDI1Q8WTU0 396 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 CANT1Q8WVQ1 401 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 C19orf43Q9BQ61 176 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 FEM1AQ9BSK4 669 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 GPR63Q9BZJ6 419 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 VCX3AQ9NNX9 186 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 EIF2B4Q9UI10 523 aaKnown RBP22.13■■□□□ 1.13
PNKP-201ENST00000322344 ZNF225Q9UK10 706 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 PCDHA9Q9Y5H5 950 aa22.13■■□□□ 1.13
PNKP-201ENST00000322344 PRMT5O14744 637 aaPredicted RBP22.12■■□□□ 1.13
PNKP-201ENST00000322344 EEDO75530 441 aaKnown RBP22.12■■□□□ 1.13
PNKP-201ENST00000322344 IL10P22301 178 aa22.12■■□□□ 1.13
PNKP-201ENST00000322344 PRDX3P30048 256 aaKnown RBP22.12■■□□□ 1.13
PNKP-201ENST00000322344 HMGCLP35914 325 aa22.12■■□□□ 1.13
PNKP-201ENST00000322344 TGFBIQ15582 683 aa22.12■■□□□ 1.13
PNKP-201ENST00000322344 NRF1Q16656 503 aa22.12■■□□□ 1.13
PNKP-201ENST00000322344 FBXO48Q5FWF7 155 aa22.12■■□□□ 1.13
PNKP-201ENST00000322344 ADAMTSL2Q86TH1 951 aa22.12■■□□□ 1.13
PNKP-201ENST00000322344 SATL1Q86VE3 508 aa22.12■■□□□ 1.13
PNKP-201ENST00000322344 PACRGLQ8N7B6 248 aa22.12■■□□□ 1.13
PNKP-201ENST00000322344 LEF1Q9UJU2 399 aaPredicted RBP22.12■■□□□ 1.13
PNKP-201ENST00000322344 C7orf72A4D263 438 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 SLC22A3O75751 556 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 PGM3O95394 542 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 CXCL10P02778 98 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 MBL2P11226 248 aaPredicted RBP22.11■■□□□ 1.13
PNKP-201ENST00000322344 MZF1P28698 734 aaPredicted RBP22.11■■□□□ 1.13
PNKP-201ENST00000322344 NFYCQ13952 458 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 PCBP2Q15366 365 aaKnown RBP eCLIP22.11■■□□□ 1.13
PNKP-201ENST00000322344 ARMC12Q5T9G4 340 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 NOL11Q9H8H0 719 aaKnown RBP22.11■■□□□ 1.13
PNKP-201ENST00000322344 APPL1Q9UKG1 709 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 FNDC3AQ9Y2H6 1198 aaKnown RBP22.11■■□□□ 1.13
PNKP-201ENST00000322344 PCDHB9Q9Y5E1 797 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 OR51B4Q9Y5P0 310 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 DHRS12A0PJE2 317 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 DYTNA2CJ06 578 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 GRXCR2A6NFK2 248 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 AKAP10O43572 662 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 TFAP2AP05549 437 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 RPS3P23396 243 aaKnown RBP eCLIP22.11■■□□□ 1.13
PNKP-201ENST00000322344 PSMA4P25789 261 aaKnown RBP22.11■■□□□ 1.13
PNKP-201ENST00000322344 CAPRIN1Q14444 709 aaKnown RBP22.11■■□□□ 1.13
PNKP-201ENST00000322344 PPP4R4Q6NUP7 873 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 AMIGO2Q86SJ2 522 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 TMEM125Q96AQ2 219 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 MYO19Q96H55 970 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 SARS2Q9NP81 518 aaKnown RBP22.11■■□□□ 1.13
PNKP-201ENST00000322344 SUN2Q9UH99 717 aa22.11■■□□□ 1.13
PNKP-201ENST00000322344 FAM234BA2RU67 622 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 CCDC154A6NI56 674 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 TIPRLO75663 272 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 PARNO95453 639 aaKnown RBP22.1■■□□□ 1.13
PNKP-201ENST00000322344 NPPAP01160 153 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 SOD2P04179 222 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 S100BP04271 92 aaPredicted RBP22.1■■□□□ 1.13
PNKP-201ENST00000322344 SMAD3P84022 425 aaKnown RBP22.1■■□□□ 1.13
PNKP-201ENST00000322344 APOFQ13790 326 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 TBCELQ5QJ74 424 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 ZBTB49Q6ZSB9 765 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 FRA10AC1Q70Z53 315 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 DCAF4L2Q8NA75 395 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 DGCR14Q96DF8 476 aaKnown RBP22.1■■□□□ 1.13
PNKP-201ENST00000322344 SLC45A3Q96JT2 553 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 GMPR2Q9P2T1 348 aaKnown RBP22.1■■□□□ 1.13
PNKP-201ENST00000322344 DNMT3BQ9UBC3 853 aaKnown RBP22.1■■□□□ 1.13
PNKP-201ENST00000322344 VPS51Q9UID3 782 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 PCDHGB4Q9UN71 923 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 PCDHGB5Q9Y5G0 923 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 CENPFP49454 3210 aa22.1■■□□□ 1.13
PNKP-201ENST00000322344 C9JVG2 144 aa22.09■■□□□ 1.13
PNKP-201ENST00000322344 OR4F21O95013 312 aa22.09■■□□□ 1.13
PNKP-201ENST00000322344 PGLSO95336 258 aa22.09■■□□□ 1.13
PNKP-201ENST00000322344 GPIP06744 558 aa22.09■■□□□ 1.13
PNKP-201ENST00000322344 ZNF7P17097 686 aaPredicted RBP22.09■■□□□ 1.13
PNKP-201ENST00000322344 POLR2JP52435 117 aaKnown RBP22.09■■□□□ 1.13
PNKP-201ENST00000322344 TMEM199Q8N511 208 aa22.09■■□□□ 1.13
PNKP-201ENST00000322344 PLEKHG4BQ96PX9 1271 aa22.09■■□□□ 1.13
PNKP-201ENST00000322344 CIB1Q99828 191 aa22.09■■□□□ 1.13
PNKP-201ENST00000322344 SMPD4Q9NXE4 827 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms