RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SLC10A3P09131 477 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 SLC5A2P31639 672 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 PIK3CGP48736 1102 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 CDH4P55283 916 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 PRMT9Q6P2P2 845 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 SLC2A7Q6PXP3 512 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 OFCC1Q8IZS5 231 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 ANKFN1Q8N957 763 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 TMEM125Q96AQ2 219 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 UHRF1Q96T88 793 aaPredicted RBP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 HAUS8Q9BT25 410 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 PNPLA3Q9NST1 481 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 ARMC1Q9NVT9 282 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 ACTR3BQ9P1U1 418 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 PRRC2BQ5JSZ5 2229 aaKnown RBP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 H3BNC9 293 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 H3BNH8 94 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 HNRNPRO43390 633 aaKnown RBP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 CNPP09543 421 aaKnown RBP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 POLR2JP52435 117 aaKnown RBP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 TRAF2Q12933 501 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 ATXN7L2Q5T6C5 722 aaPredicted RBP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 TTC33Q6PID6 262 aaPredicted RBP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 CAMK1DQ8IU85 385 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 KIAA2013Q8IYS2 634 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 OR56A4Q8NGH8 313 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 METTL6Q8TCB7 284 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 ZUFSPQ96AP4 578 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 PPM1MQ96MI6 270 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 PLEKHG4BQ96PX9 1271 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 PCDHA9Q9Y5H5 950 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 OAS3Q9Y6K5 1087 aaKnown RBP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 TET1Q8NFU7 2136 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 MATN4O95460 622 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 TSPAN12O95859 305 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 UROSP10746 265 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 HSD17B1P14061 328 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 IL12AP29459 219 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 HTR6P50406 440 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 KPNA1P52294 538 aaPredicted RBP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 TAF12Q16514 161 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 IL27RAQ6UWB1 636 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 FRA10AC1Q70Z53 315 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 ADGRG5Q8IZF4 528 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 CD200R1Q8TD46 325 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL9A1-201ENST00000320755 FBXL20Q96IG2 436 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 TM6SF2Q9BZW4 377 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 AIG1Q9NVV5 245 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 CEPT1Q9Y6K0 416 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 hCG_2014768A0A024R1R8 64 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 AQP12BA6NM10 295 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 TBKBP1A7MCY6 615 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 C1RP00736 705 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 ASLP04424 464 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 ALPIP09923 528 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 AQP12AQ8IXF9 295 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 CARNMT1Q8N4J0 409 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 FIBCD1Q8N539 461 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 FBXO22Q8NEZ5 403 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 TFAP2CQ92754 450 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 VPS50Q96JG6 964 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 TTPALQ9BTX7 342 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 FCF1Q9Y324 198 aaKnown RBP17.23■□□□□ 0.35
COL9A1-201ENST00000320755 EI24O14681 340 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 CLGNO14967 610 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 MYCP01106 439 aaPredicted RBP17.23■□□□□ 0.35
COL9A1-201ENST00000320755 CAPN1P07384 714 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 CDH2P19022 906 aaPredicted RBP17.23■□□□□ 0.35
COL9A1-201ENST00000320755 TTPAP49638 278 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 DGKQP52824 942 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 ERVPABLB-1P60509 514 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 SREBF2Q12772 1141 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 TGFBIQ15582 683 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 C6orf136Q5SQH8 315 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 HECTD3Q5T447 861 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 NANOGP8Q6NSW7 305 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 LETMD1Q6P1Q0 360 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 MAGEE2Q8TD90 523 aaPredicted RBP17.23■□□□□ 0.35
COL9A1-201ENST00000320755 BCL7CQ8WUZ0 217 aaPredicted RBP17.23■□□□□ 0.35
COL9A1-201ENST00000320755 DUS3LQ96G46 650 aaKnown RBP17.23■□□□□ 0.35
COL9A1-201ENST00000320755 SPATA17Q96L03 361 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 CASD1Q96PB1 797 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 ADGRE3Q9BY15 652 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 GPR63Q9BZJ6 419 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 RNF38Q9H0F5 515 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 NANOGQ9H9S0 305 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 SLC52A3Q9NQ40 469 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 AGPAT4Q9NRZ5 378 aa17.23■□□□□ 0.35
COL9A1-201ENST00000320755 CLDN11O75508 207 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 TMCC1O94876 653 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 MLYCDO95822 493 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 ZDHHC11BP0C7U3 371 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 MZF1P28698 734 aaPredicted RBP17.22■□□□□ 0.35
COL9A1-201ENST00000320755 BNIP2Q12982 314 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 BTG3Q14201 252 aaPredicted RBP17.22■□□□□ 0.35
COL9A1-201ENST00000320755 ATP6AP1LQ52LC2 224 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 OTUD3Q5T2D3 398 aaPredicted RBP17.22■□□□□ 0.35
COL9A1-201ENST00000320755 LPCAT2Q7L5N7 544 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 RNF145Q96MT1 663 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms