RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 IL10RBQ08334 325 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 REP15Q6BDI9 236 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 SCIMPQ6UWF3 145 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 PTGR2Q8N8N7 351 aaPredicted RBP15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 LRCH3Q96II8 777 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 CAPNS2Q96L46 248 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 GNPTGQ9UJJ9 305 aa15.43■□□□□ 0.06
SHROOM1-201ENST00000319854 BMP2P12643 396 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 CORO1AP31146 461 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 RCVRNP35243 200 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 CSRP3P50461 194 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 RPS3AP61247 264 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 SEMG2Q02383 582 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 TWF1Q12792 350 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 LRRC49Q8IUZ0 686 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 DDIASQ8IXT1 998 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 ZNF420Q8TAQ5 688 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 TCF12Q99081 682 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 RIC8BQ9NVN3 520 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 PTBP2Q9UKA9 531 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 AURKCQ9UQB9 309 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 BTRCQ9Y297 605 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 TMEM98Q9Y2Y6 226 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 WASH4PA8MWX3 477 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 H3BMM5 538 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 BNIP3LO60238 219 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 PRAMEF11O60813 436 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 ALDH1A1P00352 501 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 ADSLP30566 484 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 SLC36A3Q495N2 470 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 CCDC80Q76M96 950 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 ISCA2Q86U28 154 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 SPPL2BQ8TCT7 592 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 TAMM41Q96BW9 452 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 ITPKCQ96DU7 683 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 RPL10LQ96L21 214 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 TRIM8Q9BZR9 551 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 RNF38Q9H0F5 515 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 DNMT3LQ9UJW3 386 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 DOCK4Q8N1I0 1966 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 MOXD2PA6NHM9 499 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 AQP9O43315 295 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 COCHO43405 550 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 OR1I1O60431 355 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 RHOBTB1O94844 696 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 HSPA1AP0DMV8 641 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 HSPA1BP0DMV9 641 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 MAGEA11P43364 429 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 PLCL1Q15111 1095 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 PARP15Q460N3 678 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 C6orf183Q5T699 404 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 ERMP1Q7Z2K6 904 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 GLT6D1Q7Z4J2 308 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 OR4L1Q8NH43 312 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 CSF3RQ99062 836 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 NANOGQ9H9S0 305 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 ARNT2Q9HBZ2 717 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 CATSPERZQ9NTU4 200 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 GALPQ9UBC7 116 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 VPS51Q9UID3 782 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 ST14Q9Y5Y6 855 aa15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 KIAA0100Q14667 2235 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-201ENST00000319854 GREB1Q4ZG55 1949 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 IGLV3-10A0A075B6K4 115 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 MROH6A6NGR9 719 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 ACSL4O60488 711 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 KPNA2P52292 529 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 FOXA1P55317 472 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 OR4D1Q15615 310 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 KLHDC8BQ8IXV7 354 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 TRUB1Q8WWH5 349 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 TSPAN17Q96FV3 270 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 DUS3LQ96G46 650 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 TM6SF2Q9BZW4 377 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 SEMA4BQ9NPR2 832 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 OLA1Q9NTK5 396 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 GID8Q9NWU2 228 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 UBA2Q9UBT2 640 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 TRAF6Q9Y4K3 522 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 A0A1B0GTL3 188 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 IQCF5A8MTL0 148 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 TMEM189-UBE2V1I3L0A0 370 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 SLC7A4O43246 635 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 SEC24AO95486 1093 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 RHOCP08134 193 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 HOXD9P28356 352 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 PRKAA2P54646 552 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 MRPL58Q14197 206 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 KIF19Q2TAC6 998 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 PAQR3Q6TCH7 311 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 KIAA0408Q6ZU52 694 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 CADM3Q8N126 398 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 MFSD2AQ8NA29 543 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 C3orf30Q96M34 536 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 MFSD1Q9H3U5 465 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 MRM3Q9HC36 420 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 MID1IP1Q9NPA3 183 aa15.41■□□□□ 0.06
SHROOM1-201ENST00000319854 VTI1BQ9UEU0 232 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms