RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 LRCH1Q9Y2L9 728 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 SLC30A1Q9Y6M5 507 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 BPTFQ12830 3046 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 TNRC18O15417 2968 aaPredicted RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 UPK3BL1B0FP48 263 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 UPK3BL2E5RIL1 263 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 GRID2O43424 1007 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 KIF1CO43896 1103 aaKnown RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 PRSS56P0CW18 603 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 THRAP10827 490 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 XPAP23025 273 aaPredicted RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 ATP5F1P24539 256 aaPredicted RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 STC1P52823 247 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 PGGT1BP53609 377 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 CUL3Q13618 768 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 ELAVL3Q14576 367 aaKnown RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 ZRANB3Q5FWF4 1079 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 AGAP9Q5VTM2 703 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 LRRC66Q68CR7 880 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 LSMEM2Q8N112 164 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 CBARPQ8N350 705 aaPredicted RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 CPSF7Q8N684 471 aaKnown RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 PNPLA1Q8N8W4 532 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 TMIEQ8NEW7 156 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 HEXDCQ8WVB3 486 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 TCF12Q99081 682 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 TRPV5Q9NQA5 729 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 INTS10Q9NVR2 710 aaKnown RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 ZDHHC2Q9UIJ5 367 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 APPL1Q9UKG1 709 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 HCN2Q9UL51 889 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 CORO1CQ9ULV4 474 aaPredicted RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 CDYLQ9Y232 598 aa12.54□□□□□ -0.4
PTPN6-201ENST00000318974 FNDC3AQ9Y2H6 1198 aaKnown RBP12.54□□□□□ -0.4
PTPN6-201ENST00000318974 LOC100653049A0A140TA62 436 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 C16orf96A6NNT2 1141 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 KPNA3O00505 521 aaPredicted RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 PFDN6O15212 129 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 KRT34O76011 436 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 HNRNPLP14866 589 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 TIMP2P16035 220 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 LHCGRP22888 699 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 VIPR1P32241 457 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 TNFRSF4P43489 277 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 SEMG2Q02383 582 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 CACNG1Q06432 222 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 ARHGEF7Q14155 803 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 LSM12Q3MHD2 195 aaKnown RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 LRRC73Q5JTD7 316 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 AARS2Q5JTZ9 985 aaKnown RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 DEFB107AQ8IZN7 70 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 PBXIP1Q96AQ6 731 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 ACOX2Q99424 681 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 CDX2Q99626 313 aaPredicted RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 PHF7Q9BWX1 381 aaPredicted RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 KCNK12Q9HB15 430 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 IGSF5Q9NSI5 407 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 NDE1Q9NXR1 346 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 CACNA2D2Q9NY47 1150 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 LIMD1Q9UGP4 676 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 KIAA1549LQ6ZVL6 1849 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 PDE4DIPQ5VU43 2346 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 GOLGA8QA0A0J9YX86 632 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 RGSL1A5PLK6 1076 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 GOLGA8OA6NCC3 632 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 ANTXRLA6NF34 631 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 GOLGA8NF8WBI6 632 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 NPC1O15118 1278 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 NDUFS3O75489 264 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 EPHX1P07099 455 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 ZNF30P17039 623 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 BPIP17213 487 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 EPHA3P29320 983 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 CTHP32929 405 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 PPARGP37231 505 aaPredicted RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 SPAM1P38567 509 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 PTPN5P54829 565 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 MRPS35P82673 323 aaKnown RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 TBL3Q12788 808 aaKnown RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 POM121L1PQ3SYA9 428 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 TECRLQ5HYJ1 363 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 RBM20Q5T481 1227 aaKnown RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 FAM45BPQ6NSW5 357 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 PSAPL1Q6NUJ1 521 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 KLC3Q6P597 504 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 SLC44A3Q8N4M1 653 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 RP9Q8TA86 221 aaKnown RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 PIP4K2CQ8TBX8 421 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 FAM45AQ8TCE6 357 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 MIEF2Q96C03 454 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 LENG8Q96PV6 779 aaPredicted RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 NDNQ99608 321 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 ZNF184Q99676 751 aaPredicted RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 NUF2Q9BZD4 464 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 SHCBP1LQ9BZQ2 653 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 WDR55Q9H6Y2 383 aaPredicted RBP12.53□□□□□ -0.4
PTPN6-201ENST00000318974 ZDHHC4Q9NPG8 344 aa12.53□□□□□ -0.4
PTPN6-201ENST00000318974 SARDHQ9UL12 918 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms