RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 TMEM209Q96SK2 561 aa14.09□□□□□ -0.15
PABPC1-201ENST00000318607 SMOQ99835 787 aa14.09□□□□□ -0.15
PABPC1-201ENST00000318607 EGFL8Q99944 293 aa14.09□□□□□ -0.15
PABPC1-201ENST00000318607 ZNF385DQ9H6B1 395 aa14.09□□□□□ -0.15
PABPC1-201ENST00000318607 FBXW11Q9UKB1 542 aa14.09□□□□□ -0.15
PABPC1-201ENST00000318607 CYBBP04839 570 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 TGFB3P10600 412 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 PABPC1P11940 636 aaKnown RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 IFITM3Q01628 133 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 TRAP1Q12931 704 aaKnown RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 PAFAH1B3Q15102 231 aaKnown RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 FAM117BQ6P1L5 589 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 NOTUMQ6P988 496 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 DTWD1Q8N5C7 304 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 SH3YL1Q96HL8 342 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 FEM1CQ96JP0 617 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 MYRFLQ96LU7 910 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 WDR6Q9NNW5 1121 aaKnown RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 EXOSC4Q9NPD3 245 aaKnown RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 CRTAC1Q9NQ79 661 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 ABI2Q9NYB9 513 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 ACTR3BQ9P1U1 418 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 WDR37Q9Y2I8 494 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 ANGPTL3Q9Y5C1 460 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 TARM1B6A8C7 271 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 F8W810 466 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 SOAT2O75908 522 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 RASAL1O95294 804 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 HOXA11P31270 313 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 POLR2JP52435 117 aaKnown RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 RPL38P63173 70 aaKnown RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 ENPEPQ07075 957 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 TSTA3Q13630 321 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 FAM98BQ52LJ0 330 aaKnown RBP14.08□□□□□ -0.16
PABPC1-201ENST00000318607 NIPAL1Q6NVV3 410 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 SPARTQ8N0X7 666 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 KIFC1Q9BW19 673 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 KATNAL1Q9BW62 490 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 NACA2Q9H009 215 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 MEAF6Q9HAF1 191 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 PADI4Q9UM07 663 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 PCDHGA3Q9Y5H0 932 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 ORC6Q9Y5N6 252 aa14.08□□□□□ -0.16
PABPC1-201ENST00000318607 E5RI56 91 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 M0R129 80 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 SNPHO15079 494 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 ACOX3O15254 700 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 AQP9O43315 295 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 DAB1O75553 588 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 HAPLN1P10915 354 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-201ENST00000318607 HTR6P50406 440 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 CLCNKBP51801 687 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 DAOAP59103 153 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 BEX3Q00994 111 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 TRIM32Q13049 653 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 ZNF598Q86UK7 904 aaKnown RBP14.07□□□□□ -0.16
PABPC1-201ENST00000318607 ST13P5Q8NFI4 369 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-201ENST00000318607 TPK1Q9H3S4 243 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 TBCCD1Q9NVR7 557 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 ASB1Q9Y576 335 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 NDUFS2O75306 463 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 NDUFS3O75489 264 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 GLP2RO95838 553 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 SLC2A3P11169 496 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 G6PDP11413 515 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 IMPDH1P20839 514 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 GEMP55040 296 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 EFEMP1Q12805 493 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 ATP6AP1Q15904 470 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 ZRANB3Q5FWF4 1079 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 PAQR9Q6ZVX9 377 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 C11orf74Q86VG3 221 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 FAR2Q96K12 515 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 GPR21Q99679 349 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 SEMA3CQ99985 751 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 C14orf119Q9NWQ9 140 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 SEPT3Q9UH03 358 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 A0A087X1B8 175 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 PNMA8CA0A1B0GUJ8 204 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 C16orf96A6NNT2 1141 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 MBL2P11226 248 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-201ENST00000318607 AXLP30530 894 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 MAGEA12P43365 314 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 ARCN1P48444 511 aaKnown RBP14.07□□□□□ -0.16
PABPC1-201ENST00000318607 PTPRNQ16849 979 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 CATSPEREQ5SY80 951 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 KCTD11Q693B1 232 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 ZNF773Q6PK81 442 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 Q6ZPB1 254 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-201ENST00000318607 FRA10AC1Q70Z53 315 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 RBM23Q86U06 439 aaKnown RBP14.07□□□□□ -0.16
PABPC1-201ENST00000318607 SLC22A17Q8WUG5 538 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 MRGPRX2Q96LB1 330 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 RNF167Q9H6Y7 350 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 NSMCE4AQ9NXX6 385 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 PGAP2Q9UHJ9 254 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 VPS28Q9UK41 221 aa14.07□□□□□ -0.16
PABPC1-201ENST00000318607 OR1I1O60431 355 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 NIPSNAP2O75323 286 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 HK2P52789 917 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms