RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 HPRP00739 348 aa18.93■□□□□ 0.62
RTN4-201ENST00000317610 PAN2Q504Q3 1202 aaKnown RBP18.93■□□□□ 0.62
RTN4-201ENST00000317610 TAF2Q6P1X5 1199 aa18.93■□□□□ 0.62
RTN4-201ENST00000317610 C16orf87Q6PH81 154 aa18.93■□□□□ 0.62
RTN4-201ENST00000317610 TXNDC11Q6PKC3 985 aa18.93■□□□□ 0.62
RTN4-201ENST00000317610 MRPL10Q7Z7H8 261 aaKnown RBP18.93■□□□□ 0.62
RTN4-201ENST00000317610 CCDC68Q9H2F9 335 aa18.93■□□□□ 0.62
RTN4-201ENST00000317610 PFDN4Q9NQP4 134 aa18.93■□□□□ 0.62
RTN4-201ENST00000317610 SUN2Q9UH99 717 aa18.93■□□□□ 0.62
RTN4-201ENST00000317610 UTRNP46939 3433 aa18.93■□□□□ 0.62
RTN4-201ENST00000317610 TMEM221A6NGB7 291 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 DEAF1O75398 565 aaPredicted RBP18.92■□□□□ 0.62
RTN4-201ENST00000317610 RHOBTB1O94844 696 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 CES1P23141 567 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 GRIK1P39086 918 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 PBX3P40426 434 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 CPT1AP50416 773 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 PLXNA3P51805 1871 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 TSPY1Q01534 308 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 POLD3Q15054 466 aaPredicted RBP18.92■□□□□ 0.62
RTN4-201ENST00000317610 TSNQ15631 228 aaKnown RBP18.92■□□□□ 0.62
RTN4-201ENST00000317610 OVOS1Q6IE37 1185 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 TMEM214Q6NUQ4 689 aaKnown RBP18.92■□□□□ 0.62
RTN4-201ENST00000317610 ITIH5Q86UX2 942 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 PROKR1Q8TCW9 393 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 GLT1D1Q96MS3 346 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 RDH12Q96NR8 316 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 SEMA3CQ99985 751 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 SGIP1Q9BQI5 828 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 KATNAL1Q9BW62 490 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 RIC8BQ9NVN3 520 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 TAS2R13Q9NYV9 303 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 PSME2Q9UL46 239 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 B4GAT1O43505 415 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 BCL10O95999 233 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 FUCA1P04066 466 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 THRBP10828 461 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 CRHBPP24387 322 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 GSTM2P28161 218 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 PSMD7P51665 324 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 RAD51Q06609 339 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 OTUD3Q5T2D3 398 aaPredicted RBP18.92■□□□□ 0.62
RTN4-201ENST00000317610 DLEU7Q6UYE1 221 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 SPATA2LQ8IUW3 424 aaPredicted RBP18.92■□□□□ 0.62
RTN4-201ENST00000317610 THEM5Q8N1Q8 247 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 SLC10A4Q96EP9 437 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 NRBF2Q96F24 287 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 MAGED4Q96JG8 741 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 MS4A4AQ96JQ5 239 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 TRPV2Q9Y5S1 764 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 TTC3P53804 2025 aa18.92■□□□□ 0.62
RTN4-201ENST00000317610 GJB3O75712 270 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 ZNF865P0CJ78 1059 aaPredicted RBP18.91■□□□□ 0.62
RTN4-201ENST00000317610 RAP2AP10114 183 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 SOX11P35716 441 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 BCAP31P51572 246 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 ZIK1Q3SY52 487 aaPredicted RBP18.91■□□□□ 0.62
RTN4-201ENST00000317610 C6orf136Q5SQH8 315 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 THAP5Q7Z6K1 395 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 DTWD1Q8N5C7 304 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 SLC15A4Q8N697 577 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 NLGN2Q8NFZ4 835 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 TMBIM1Q969X1 311 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 CDKN2AIPNLQ96HQ2 116 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 POLR1EQ9GZS1 481 aaKnown RBP18.91■□□□□ 0.62
RTN4-201ENST00000317610 LHPPQ9H008 270 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 CORINQ9Y5Q5 1042 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 V9GYQ6 96 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 K7EPI3 171 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 CDC7O00311 574 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 ARNTLO00327 626 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 SYNCRIPO60506 623 aaKnown RBP18.91■□□□□ 0.62
RTN4-201ENST00000317610 SERPINB7O75635 380 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 SOAT2O75908 522 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 CLPXO76031 633 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 EEF1B2P24534 225 aaKnown RBP18.91■□□□□ 0.62
RTN4-201ENST00000317610 CASP2P42575 452 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 TBX4P57082 545 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 PRKG2Q13237 762 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 SKIV2LQ15477 1246 aaKnown RBP18.91■□□□□ 0.62
RTN4-201ENST00000317610 FBXO48Q5FWF7 155 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 UGT3A1Q6NUS8 523 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 SLC2A7Q6PXP3 512 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 HDAC2Q92769 488 aaKnown RBP18.91■□□□□ 0.62
RTN4-201ENST00000317610 AURKBQ96GD4 344 aaPredicted RBP18.91■□□□□ 0.62
RTN4-201ENST00000317610 CSF3RQ99062 836 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 HPS4Q9NQG7 708 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 HEBP1Q9NRV9 189 aa18.91■□□□□ 0.62
RTN4-201ENST00000317610 TCF3P15923 654 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 PAX3P23760 479 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 AGTR2P50052 363 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 BEX3Q00994 111 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 SERINC3Q13530 473 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 RNF168Q8IYW5 571 aaPredicted RBP18.9■□□□□ 0.62
RTN4-201ENST00000317610 OR56A4Q8NGH8 313 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 SLC22A17Q8WUG5 538 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 HGH1Q9BTY7 390 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 ING2Q9H160 280 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 SEPT3Q9UH03 358 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 SCML2Q9UQR0 700 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms