RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 OPRD1P41143 372 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 NSG1P42857 185 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 SLC12A2P55011 1212 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 POLR2LP62875 67 aaKnown RBP7.09□□□□□ -1.27
NPHP1-201ENST00000316534 SP140Q13342 867 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 FXNQ16595 210 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 SPATS1Q496A3 300 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 GGTA1PQ4G0N0 100 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 PLEKHS1Q5SXH7 462 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 LRRC66Q68CR7 880 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 SYCE2Q6PIF2 218 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 TSPAN33Q86UF1 283 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 ZNF354CQ86Y25 554 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 RNF135Q8IUD6 432 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 TEX9Q8N6V9 391 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 PNPLA1Q8N8W4 532 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 CHST14Q8NCH0 376 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 FBXO27Q8NI29 283 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 HDAC8Q9BY41 377 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 TUBB1Q9H4B7 451 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 BRD9Q9H8M2 597 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 TRPV5Q9NQA5 729 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 CPSF2Q9P2I0 782 aaKnown RBP7.09□□□□□ -1.27
NPHP1-201ENST00000316534 IL36AQ9UHA7 158 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 MKI67P46013 3256 aaKnown RBP7.09□□□□□ -1.27
NPHP1-201ENST00000316534 PRR19A6NJB7 356 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 ANHXE9PGG2 379 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 VPS4BO75351 444 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 GPC4O75487 556 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 NDUFS3O75489 264 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 ZNF7P17097 686 aaPredicted RBP7.09□□□□□ -1.27
NPHP1-201ENST00000316534 ITGB7P26010 798 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 FMO4P31512 558 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 UBAP2LQ14157 1087 aaKnown RBP7.09□□□□□ -1.27
NPHP1-201ENST00000316534 C11orf91Q3C1V1 193 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 BCL7AQ4VC05 210 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 VITQ6UXI7 678 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 MYLK4Q86YV6 388 aaPredicted RBP7.09□□□□□ -1.27
NPHP1-201ENST00000316534 CLYBLQ8N0X4 340 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 RBM15BQ8NDT2 890 aaKnown RBP7.09□□□□□ -1.27
NPHP1-201ENST00000316534 TNKS2Q9H2K2 1166 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 ALG9Q9H6U8 611 aa7.09□□□□□ -1.27
NPHP1-201ENST00000316534 CNOT6Q9ULM6 557 aaKnown RBP7.09□□□□□ -1.27
NPHP1-201ENST00000316534 NEMP2A6NFY4 417 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 OTOL1A6NHN0 477 aaPredicted RBP7.09□□□□□ -1.28
NPHP1-201ENST00000316534 UPK3BL1B0FP48 263 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 UPK3BL2E5RIL1 263 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 NPC1O15118 1278 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 SMIM24O75264 130 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 NIPSNAP2O75323 286 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 SLCO2B1O94956 709 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 NFATC1O95644 943 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 MSH3P20585 1137 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 ITGAXP20702 1163 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 MAGEA10P43363 369 aaPredicted RBP7.09□□□□□ -1.28
NPHP1-201ENST00000316534 SLC6A12P48065 614 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 GLRBP48167 497 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 PKNOX1P55347 436 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 HYAL1Q12794 435 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 LCP2Q13094 533 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 ADAM15Q13444 863 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 RAB30Q15771 203 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 CHRNA6Q15825 494 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 VWA5B1Q5TIE3 1220 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.09□□□□□ -1.28
NPHP1-201ENST00000316534 SIDT2Q8NBJ9 832 aaKnown RBP7.09□□□□□ -1.28
NPHP1-201ENST00000316534 BPIFB1Q8TDL5 484 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 EEF1AKMT1Q8WVE0 214 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 THOC1Q96FV9 657 aaKnown RBP7.09□□□□□ -1.28
NPHP1-201ENST00000316534 FAM129BQ96TA1 746 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 TMEM79Q9BSE2 394 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 DUS2Q9NX74 493 aaKnown RBP7.09□□□□□ -1.28
NPHP1-201ENST00000316534 EPS15L1Q9UBC2 864 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 LRRC42Q9Y546 428 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 DNAJC15Q9Y5T4 150 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 WNT6Q9Y6F9 365 aa7.09□□□□□ -1.28
NPHP1-201ENST00000316534 KCNE1BA0A087WTH5 132 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 OR7A17O14581 309 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 CHUKO15111 745 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 BUD23O43709 281 aaKnown RBP7.08□□□□□ -1.28
NPHP1-201ENST00000316534 AP1G1O43747 822 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 RHOBTB1O94844 696 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 CYP2A6P11509 494 aaPredicted RBP7.08□□□□□ -1.28
NPHP1-201ENST00000316534 COX4I1P13073 169 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 GPX3P22352 226 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 CCND1P24385 295 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 MNAT1P51948 309 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 IL2P60568 153 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 IRX4P78413 519 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 ZNF33BQ06732 778 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 PDAP1Q13442 181 aaKnown RBP7.08□□□□□ -1.28
NPHP1-201ENST00000316534 SQLEQ14534 574 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 HNRNPA1L2Q32P51 320 aaKnown RBP7.08□□□□□ -1.28
NPHP1-201ENST00000316534 LONP2Q86WA8 852 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 SPATA6LQ8N4H0 392 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 CMTM5Q96DZ9 223 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 GPATCH1Q9BRR8 931 aaKnown RBP7.08□□□□□ -1.28
NPHP1-201ENST00000316534 NTMT1Q9BV86 223 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 ELOVL2Q9NXB9 296 aa7.08□□□□□ -1.28
NPHP1-201ENST00000316534 THAP10Q9P2Z0 257 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms