RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SSTR1P30872 391 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 IDH3AP50213 366 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 AKR1D1P51857 326 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 FAPQ12884 760 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 SKIV2LQ15477 1246 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 PSMD5Q16401 504 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 RTP2Q5QGT7 225 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 LIPIQ6XZB0 460 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 CNTN4Q8IWV2 1026 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 FBXO36Q8NEA4 188 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 OR8K5Q8NH50 307 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 IL31RAQ8NI17 732 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 ASB12Q8WXK4 309 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 PDXPQ96GD0 296 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 PHOX2BQ99453 314 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 EBNA1BP2Q99848 306 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 MRPL4Q9BYD3 311 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 MUC13Q9H3R2 512 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 UCK1Q9HA47 277 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 GBA2Q9HCG7 927 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 ZFP14Q9HCL3 533 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 RANGRFQ9HD47 186 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 JPH1Q9HDC5 661 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 PCDHB16Q9NRJ7 776 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 TAS2R9Q9NYW1 312 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 RBAKQ9NYW8 714 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 SLC9A2Q9UBY0 812 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 VTI1BQ9UEU0 232 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 TSR3Q9UJK0 312 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 MAGED2Q9UNF1 606 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 TNFSF13BQ9Y275 285 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 PCDHB12Q9Y5F1 795 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 HSPE1-MOB4S4R3N1 261 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 ZBTB39O15060 712 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 ADAMTS4O75173 837 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 XYLBO75191 536 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 CILPO75339 1184 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 RGS20O76081 388 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 MICAL2O94851 1124 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 MPOP05164 745 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 BMP2P12643 396 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 HOXD8P13378 290 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 ZNF30P17039 623 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 HOXB6P17509 224 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 CCR10P46092 362 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 GDI2P50395 445 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 ERVK-8P63133 956 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 NKX3-2P78367 333 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 FLI1Q01543 452 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 ROR1Q01973 937 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 RHDQ02161 417 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 PPIL2Q13356 520 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 MSS51Q4VC12 460 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 COQ5Q5HYK3 327 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 INTS11Q5TA45 600 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 VWA5B1Q5TIE3 1220 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 DPH6Q7L8W6 267 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 PAGE2Q7Z2X7 111 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 STX12Q86Y82 276 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 LIX1LQ8IVB5 337 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 PGAM4Q8N0Y7 254 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 CBR4Q8N4T8 237 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 MCOLN3Q8TDD5 553 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 EMID1Q96A84 441 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 PPWD1Q96BP3 646 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 RNF157Q96PX1 679 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 FYTTD1Q96QD9 318 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 SLC9A7Q96T83 725 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 ACO2Q99798 780 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 BCL7BQ9BQE9 202 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 NUSAP1Q9BXS6 441 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 TRIM45Q9H8W5 580 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 TMLHEQ9NVH6 421 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 EVA1BQ9NVM1 165 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 CD274Q9NZQ7 290 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 TLK1Q9UKI8 766 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 NUDT5Q9UKK9 219 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 CNOT6Q9ULM6 557 aaKnown RBP6.6□□□□□ -1.35
ZNF540-201ENST00000316433 SCML1Q9UN30 329 aa6.6□□□□□ -1.35
ZNF540-201ENST00000316433 SLC15A5A6NIM6 579 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 STMND1H3BQB6 276 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 CYB561D2O14569 222 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 BANF1O75531 89 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 NR3C2P08235 984 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 FGF3P11487 239 aaPredicted RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 TNNI3P19429 210 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 SLC7A1P30825 629 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 DGKQP52824 942 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 DSC1Q08554 894 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 SCAPQ12770 1279 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 TNFAIP1Q13829 316 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 DUOXA2Q1HG44 320 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 XKR9Q5GH70 373 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 SPANXN3Q5MJ09 141 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ZCCHC23Q6ZST2 131 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 MAVSQ7Z434 540 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 UNC93AQ86WB7 457 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 CNTD1Q8N815 330 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms