RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RUFY3Q7L099 469 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 DPPA4Q7L190 304 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 MB21D2Q8IYB1 491 aaPredicted RBP4.07□□□□□ -1.76
SMCO3-201ENST00000316048 ZDHHC23Q8IYP9 409 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 FAM185AQ8N0U4 392 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 TDRD5Q8NAT2 981 aaKnown RBP4.07□□□□□ -1.76
SMCO3-201ENST00000316048 BEST2Q8NFU1 509 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 DDB2Q92466 427 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 JAKMIP1Q96N16 626 aaKnown RBP4.07□□□□□ -1.76
SMCO3-201ENST00000316048 SIGLEC11Q96RL6 698 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 WDR77Q9BQA1 342 aaPredicted RBP4.07□□□□□ -1.76
SMCO3-201ENST00000316048 WDR83Q9BRX9 315 aaKnown RBP4.07□□□□□ -1.76
SMCO3-201ENST00000316048 UPF3BQ9BZI7 483 aaKnown RBP4.07□□□□□ -1.76
SMCO3-201ENST00000316048 SCAND2PQ9GZW5 306 aaPredicted RBP4.07□□□□□ -1.76
SMCO3-201ENST00000316048 IL25Q9H293 177 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 KCNN2Q9H2S1 579 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 PDRG1Q9NUG6 133 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 SLC9A2Q9UBY0 812 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 NIP7Q9Y221 180 aaKnown RBP eCLIP4.07□□□□□ -1.76
SMCO3-201ENST00000316048 NFE2L3Q9Y4A8 694 aa4.07□□□□□ -1.76
SMCO3-201ENST00000316048 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.07□□□□□ -1.76
SMCO3-201ENST00000316048 ARID1BQ8NFD5 2236 aaPredicted RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 TJP1Q07157 1748 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 A0A0D9SFI3 127 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 TMEM202A6NGA9 273 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 ATG13O75143 517 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 CSPG5O95196 566 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 GGPS1O95749 300 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 MMP2P08253 660 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 UQCRFS1P1P0C7P4 283 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 TMEM11P17152 192 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 HOXA13P31271 388 aaPredicted RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 AVPR1AP37288 418 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 THPOP40225 353 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 CAPZA2P47755 286 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 RAD23AP54725 363 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 RPS13P62277 151 aaKnown RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 CAMK2DQ13557 499 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 IL11RAQ14626 422 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 SHBQ15464 509 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF628Q5EBL2 1059 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 KRBOX4Q5JUW0 171 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 BLOC1S2Q6QNY1 142 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 IL27RAQ6UWB1 636 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 PQLC2Q6ZP29 291 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 TRILQ7L0X0 811 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 GALNTL5Q7Z4T8 443 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 RBFAQ8N0V3 343 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 MMP21Q8N119 569 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 GALNT16Q8N428 558 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 OR8K5Q8NH50 307 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 HASPINQ8TF76 798 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF622Q969S3 477 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 EGLN2Q96KS0 407 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 ACOX2Q99424 681 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 FAM118BQ9BPY3 351 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 TUBB6Q9BUF5 446 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 KIFC3Q9BVG8 833 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 RABEP2Q9H5N1 569 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 MKKSQ9NPJ1 570 aaPredicted RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 SLC35C2Q9NQQ7 365 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 MTMR10Q9NXD2 777 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 COPG2Q9UBF2 871 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 ABCC12Q96J65 1359 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 UBN2Q6ZU65 1347 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 OGG1O15527 345 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 SPRY1O43609 319 aaPredicted RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 FZD7O75084 574 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 BCL10O95999 233 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 LIG4P49917 911 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 CDH12P55289 794 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 GHRHRQ02643 423 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 HEPHL1Q6MZM0 1159 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 LINGO2Q7L985 606 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 SLFN11Q7Z7L1 901 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 SDCCAG8Q86SQ7 713 aaPredicted RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 MINDY1Q8N5J2 469 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 SYT2Q8N9I0 419 aaPredicted RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 POMGNT2Q8NAT1 580 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 ENGASEQ8NFI3 743 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 SGCDQ92629 289 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 LINC00615Q96LM1 132 aaPredicted RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 TTC14Q96N46 770 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 SLITRK1Q96PX8 696 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 NEK1Q96PY6 1258 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 NYXQ9GZU5 481 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 OPA3Q9H6K4 179 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 CWC15Q9P013 229 aaKnown RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 MARCH4Q9P2E8 410 aaPredicted RBP4.06□□□□□ -1.76
SMCO3-201ENST00000316048 CTNNA3Q9UI47 895 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 STON1Q9Y6Q2 735 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 SLC4A4Q9Y6R1 1079 aa4.06□□□□□ -1.76
SMCO3-201ENST00000316048 NUP98P52948 1817 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF609O15014 1411 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 ANKRD36CQ5JPF3 1778 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF831Q5JPB2 1677 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 RTL9Q8NET4 1388 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 MED23Q9ULK4 1368 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 A0A1B0GVM2 712 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 LNP1A1A4G5 178 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms