RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 C16orf96A6NNT2 1141 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 SDHDO14521 159 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 IL1BP01584 269 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 CD72P21854 359 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 CES1P23141 567 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ACRV1P26436 265 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 PBLDP30039 288 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 CCR7P32248 378 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 CTSCP53634 463 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 CACNG1Q06432 222 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 CCDC15Q0P6D6 951 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 BOP1Q14137 746 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 GRB7Q14451 532 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 EGFLAMQ63HQ2 1017 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 TRIM42Q8IWZ5 723 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 FAM156AQ8NDB6 213 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 EZH1Q92800 747 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 MTIF3Q9H2K0 278 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 SUN2Q9UH99 717 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 RAP2CQ9Y3L5 183 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 KIF26AQ9ULI4 1882 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ASPMQ8IZT6 3477 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 PRMT5O14744 637 aaPredicted RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 HDAC3O15379 428 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 GYG2O15488 501 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 GSC2O15499 205 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 POP4O95707 220 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 PREPP48147 710 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 TTPAP49638 278 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 SUOXP51687 545 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 ZNF234Q14588 700 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 CCSMST1Q4G0I0 132 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 FNDC3BQ53EP0 1204 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 SBSNQ6UWP8 590 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 GK5Q6ZS86 529 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 CFAP61Q8NHU2 1237 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 DTX3LQ8TDB6 740 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 LRCH3Q96II8 777 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 THTPAQ9BU02 230 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 HTATIP2Q9BUP3 242 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 RGSL1A5PLK6 1076 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 EIF4E1BA6NMX2 242 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 AIM2O14862 343 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 ATP6V1G2O95670 118 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 RB1P06400 928 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 SERPINA6P08185 405 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 HOXA9P31269 272 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 OPRD1P41143 372 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 RALGDSQ12967 914 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 KPNB1Q14974 876 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 TGFBIQ15582 683 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 HABP4Q5JVS0 413 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 GPRC6AQ5T6X5 926 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 KLC3Q6P597 504 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 TPRG1Q6ZUI0 275 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 PARP9Q8IXQ6 854 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 AHI1Q8N157 1196 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 NXPE1Q8N323 547 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 TEX9Q8N6V9 391 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 ARRDC3Q96B67 414 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 TACO1Q9BSH4 297 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 CLPBQ9H078 707 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 FARSBQ9NSD9 589 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 ZMYM5Q9UJ78 669 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 MYO10Q9HD67 2058 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 MMP20O60882 483 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 ALDOCP09972 364 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 COL6A2P12110 1019 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 GJA4P35212 333 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 GGT5P36269 586 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 CPOXP36551 454 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 SPAM1P38567 509 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 HSPA7P48741 367 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 SPINT3P49223 89 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 HTR6P50406 440 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 HERVK_113P63132 956 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 MXRA7P84157 204 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 TFF2Q03403 129 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 UGT3A2Q3SY77 523 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 TTC31Q49AM3 519 aaPredicted RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 C2orf27AQ580R0 203 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 C9orf64Q5T6V5 341 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 LAYNQ6UX15 382 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 SNX20Q7Z614 316 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 CCDC91Q7Z6B0 441 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 SYVN1Q86TM6 617 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 SNX32Q86XE0 403 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 SCG3Q8WXD2 468 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 TSPAN17Q96FV3 270 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 NPAS2Q99743 824 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 MYOCQ99972 504 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 HEPHQ9BQS7 1158 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 ERVK-6Q9BXR3 956 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 LATS2Q9NRM7 1088 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 TXLNGQ9NUQ3 528 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 INTS10Q9NVR2 710 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 CD274Q9NZQ7 290 aa6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 COPG1Q9Y678 874 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-201ENST00000315948 UPK3BL1B0FP48 263 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms