RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TFEBP19484 476 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 CTSKP43235 329 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 BRCC3P46736 316 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 MARCKSL1P49006 195 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 BTN3A2P78410 334 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PPP2R2BQ00005 443 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 GCNT1Q02742 428 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 SIM2Q14190 667 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 GALNT3Q14435 633 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PDGFRLQ15198 375 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 DEF8Q6ZN54 512 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 R3HCC1LQ7Z5L2 792 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 MAGEB10Q96LZ2 347 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 CHCHD6Q9BRQ6 235 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PEX16Q9Y5Y5 336 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 MRPL42Q9Y6G3 142 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 ARFGEF2Q9Y6D5 1785 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 RBM47A0AV96 593 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 PER2O15055 1255 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 AIREO43918 545 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PRKD3O94806 890 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 BPGMP07738 259 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 SPATA31D3P0C874 917 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 IDO1P14902 403 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 IGFBP5P24593 272 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 ALDH4A1P30038 563 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 MAPK8P45983 427 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 TUBP50607 506 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 RAB10P61026 200 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 EVX2Q03828 476 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 DUSP4Q13115 394 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 BIKQ13323 160 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 USF2Q15853 346 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 EARS2Q5JPH6 523 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 SPATA31D4Q6ZUB0 917 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 TSTD1Q8NFU3 115 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 LNX1Q8TBB1 728 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 LRTOMTQ8WZ04 291 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 HAS1Q92839 578 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 ERMAPQ96PL5 475 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 MIR1-1HGQ9H1L0 117 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 AASDHPPTQ9NRN7 309 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 SNX15Q9NRS6 342 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 ABCG2Q9UNQ0 655 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PCDHGA4Q9Y5G9 962 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 DNAJC25-GNG10A0A024R161 153 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 FAM155AB1AL88 458 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 SLC28A1O00337 649 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 E2F2Q14209 437 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 RFWD3Q6PCD5 774 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 APTXQ7Z2E3 356 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 MINDY2Q8NBR6 621 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 ADAM32Q8TC27 787 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PIGKQ92643 395 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 HSFY1Q96LI6 401 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 PNMA5Q96PV4 448 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 RBM4BQ9BQ04 359 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 RBM4Q9BWF3 364 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 WDR55Q9H6Y2 383 aaPredicted RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 DUS2Q9NX74 493 aaKnown RBP8.13□□□□□ -1.11
VPS41-202ENST00000310301 FBXO10Q9UK96 956 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 VPS4AQ9UN37 437 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 ZNF232Q9UNY5 417 aa8.13□□□□□ -1.11
VPS41-202ENST00000310301 A0A0A0MRY4 1105 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 A0A0J9YYE9 177 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 FAM149AA5PLN7 773 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ANKDD1BA6NHY2 528 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 LRRC10BA6NIK2 292 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 BBIP1A8MTZ0 92 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 KIAA0355O15063 1070 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ZBTB14O43829 449 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 PDHA2P29803 388 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 RAB15P59190 212 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ERVK-21P61565 698 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 JAG1P78504 1218 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 PRKG2Q13237 762 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 VARS2Q5ST30 1063 aaKnown RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 KLHDC10Q6PID8 442 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 PIWIL4Q7Z3Z4 852 aaKnown RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 SLC2A14Q8TDB8 520 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 DQX1Q8TE96 717 aaKnown RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 SPATA13Q96N96 652 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 FNDC11Q9BVV2 318 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ENTPD4Q9Y227 616 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 GRIP1Q9Y3R0 1128 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 OAS3Q9Y6K5 1087 aaKnown RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 WASF2Q9Y6W5 498 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 SLX4Q8IY92 1834 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 MID1O15344 667 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 TBX1O43435 398 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 RAMP2O60895 175 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ANGPTL1O95841 491 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CALCAP01258 141 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CYP2A6P11509 494 aaPredicted RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 RPS9P46781 194 aaKnown RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 CCR4P51679 360 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CDH8P55286 799 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 MAMLD1Q13495 774 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 UGCGQ16739 394 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 GPAT3Q53EU6 434 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms