RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 RFC2P35250 354 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ATP6V1E1P36543 226 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 MRPL28Q13084 256 aaKnown RBP13.35□□□□□ -0.27
SEC23A-201ENST00000307712 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 PRAMEF19Q5SWL8 479 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 DET1Q7L5Y6 550 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 C11orf74Q86VG3 221 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 CARM1Q86X55 608 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 C2CD4AQ8NCU7 369 aaPredicted RBP13.35□□□□□ -0.27
SEC23A-201ENST00000307712 FAR1Q8WVX9 515 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 SELENOMQ8WWX9 145 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 NPLQ9BXD5 320 aaPredicted RBP13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ADGRE3Q9BY15 652 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ADAMTS10Q9H324 1103 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 MEAF6Q9HAF1 191 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 DNAJB9Q9UBS3 223 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 IKZF3Q9UKT9 509 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 A8MX80 341 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 RPP40O75818 363 aaKnown RBP13.35□□□□□ -0.27
SEC23A-201ENST00000307712 PRKD3O94806 890 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 CDK14O94921 469 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 UGT2B4P06133 528 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 OXTRP30559 389 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 PPP3CCP48454 512 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 CD97P48960 835 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ALDH3A2P51648 485 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ILF2Q12905 390 aaKnown RBP13.35□□□□□ -0.27
SEC23A-201ENST00000307712 INO80DQ53TQ3 878 aaPredicted RBP13.35□□□□□ -0.27
SEC23A-201ENST00000307712 GLB1LQ6UWU2 654 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ANKRD46Q86W74 232 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 HIPK1Q86Z02 1210 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 MTERF3Q96E29 417 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 SPON1Q9HCB6 807 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 ATP13A1Q9HD20 1204 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 MARCH2Q9P0N8 246 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 SPASTQ9UBP0 616 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 SATB2Q9UPW6 733 aa13.35□□□□□ -0.27
SEC23A-201ENST00000307712 EFCAB10A6NFE3 127 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 ZNF197O14709 1029 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 XPNPEP2O43895 674 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 FGF1P05230 155 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 CAPN3P20807 821 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 TMBIM6P55061 237 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 COPZ1P61923 177 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 LRP8Q14114 963 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 MFSD10Q14728 455 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 FAM174BQ3ZCQ3 159 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 ZNF789Q5FWF6 425 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 TXNDC11Q6PKC3 985 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 PSMG2Q969U7 264 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 ARL5AQ9Y689 179 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 ZNF195O14628 629 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 RHOCP08134 193 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 FUT4P22083 530 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 SOAT1P35610 550 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 BEX3Q00994 111 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 PFKPQ01813 784 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 SLC10A7Q0GE19 358 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 LAPTM4AQ15012 233 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 COLEC12Q5KU26 742 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 RBM48Q5RL73 367 aaKnown RBP13.34□□□□□ -0.27
SEC23A-201ENST00000307712 ZNF772Q68DY9 489 aaPredicted RBP13.34□□□□□ -0.27
SEC23A-201ENST00000307712 NANOGP8Q6NSW7 305 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 PIWIL3Q7Z3Z3 882 aaKnown RBP13.34□□□□□ -0.27
SEC23A-201ENST00000307712 GPR152Q8TDT2 470 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 TRUB1Q8WWH5 349 aaKnown RBP13.34□□□□□ -0.27
SEC23A-201ENST00000307712 HMCESQ96FZ2 354 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 CGREF1Q99674 301 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 KATNAL1Q9BW62 490 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 NANOGQ9H9S0 305 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 PDP1Q9P0J1 537 aaPredicted RBP13.34□□□□□ -0.27
SEC23A-201ENST00000307712 SH3BP4Q9P0V3 963 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 IGKV6D-21A0A0A0MT36 114 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 CCL15-CCL14A0A0B4J2E2 113 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 CENPXA8MT69 81 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 PLSCR1O15162 318 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 OTCP00480 354 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 PKMP14618 531 aaKnown RBP13.34□□□□□ -0.27
SEC23A-201ENST00000307712 MAGEA10P43363 369 aaPredicted RBP13.34□□□□□ -0.27
SEC23A-201ENST00000307712 RXRGP48443 463 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 IST1P53990 364 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 NPTX1Q15818 432 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 CCL15Q16663 113 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 STON2Q8WXE9 905 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 TEPSINQ96N21 525 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 RANBP9Q96S59 729 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 UBA2Q9UBT2 640 aaPredicted RBP13.34□□□□□ -0.27
SEC23A-201ENST00000307712 MAST2Q6P0Q8 1798 aa13.34□□□□□ -0.27
SEC23A-201ENST00000307712 TCRBV3S1A0A5B6 114 aa13.33□□□□□ -0.27
SEC23A-201ENST00000307712 FAM234BA2RU67 622 aa13.33□□□□□ -0.27
SEC23A-201ENST00000307712 CXCL11O14625 94 aa13.33□□□□□ -0.27
SEC23A-201ENST00000307712 TPD52L2O43399 206 aaKnown RBP13.33□□□□□ -0.27
SEC23A-201ENST00000307712 TSC22D2O75157 780 aa13.33□□□□□ -0.27
SEC23A-201ENST00000307712 ITGALP20701 1170 aa13.33□□□□□ -0.27
SEC23A-201ENST00000307712 VBP1P61758 197 aa13.33□□□□□ -0.27
SEC23A-201ENST00000307712 ERVK-8P63133 956 aa13.33□□□□□ -0.27
SEC23A-201ENST00000307712 APOFQ13790 326 aa13.33□□□□□ -0.27
SEC23A-201ENST00000307712 UNC50Q53HI1 259 aa13.33□□□□□ -0.27
SEC23A-201ENST00000307712 TRIM69Q86WT6 500 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms