RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SMAD5Q99717 465 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 TDRD1Q9BXT4 1180 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 H2AFY2Q9P0M6 372 aaPredicted RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 CITO14578 2027 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 G3V2L1 256 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 DENRO43583 198 aaKnown RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 HTR7P34969 479 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 GPR15P49685 360 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 SEPHS1P49903 392 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 PLD1Q13393 1074 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 C1DQ13901 141 aaKnown RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 FAM174BQ3ZCQ3 159 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 HECTD3Q5T447 861 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 TMEM126BQ8IUX1 230 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 ANKLE1Q8NAG6 615 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 DRAXINQ8NBI3 349 aaPredicted RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 UROC1Q96N76 676 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 LRTM1Q9HBL6 345 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 GALPQ9UBC7 116 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 RAI2Q9Y5P3 530 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 NHSQ6T4R5 1651 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 IGKV6-21A0A0C4DH24 114 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 TBKBP1A7MCY6 615 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 CLDN25C9JDP6 229 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 RSL1D1O76021 490 aaKnown RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 TBX18O95935 607 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 ALOX15P16050 662 aaPredicted RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 ALDH9A1P49189 494 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 ECT2LQ008S8 904 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 CNTN1Q12860 1018 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 TRIP4Q15650 581 aaPredicted RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 PIGGQ5H8A4 983 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 TYW3Q6IPR3 259 aaKnown RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 LINGO4Q6UY18 593 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 SOX17Q9H6I2 414 aaPredicted RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 STARD7Q9NQZ5 370 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 EHD3Q9NZN3 535 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 FKBPLQ9UIM3 349 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 PADI3Q9ULW8 664 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 TOGARAM1Q9Y4F4 1720 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 GABRDO14764 452 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 TULP3O75386 442 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 WEE1P30291 646 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 YBEYP58557 167 aaPredicted RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 ALDH6A1Q02252 535 aaKnown RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 TRNP1Q6NT89 227 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 TPGS1Q6ZTW0 290 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 RASAL3Q86YV0 1011 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 HIPK1Q86Z02 1210 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 MZB1Q8WU39 189 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 RAB2BQ8WUD1 216 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 ITCHQ96J02 903 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 APOLD1Q96LR9 279 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 CYP2S1Q96SQ9 504 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 FEM1AQ9BSK4 669 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 OSBPL2Q9H1P3 480 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 HMX1Q9NP08 348 aaPredicted RBP13.17□□□□□ -0.3
DDX54-201ENST00000306014 ACTR3BQ9P1U1 418 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 ASB3Q9Y575 518 aa13.17□□□□□ -0.3
DDX54-201ENST00000306014 EFCAB10A6NFE3 127 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 DCLK1O15075 740 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 LZTS3O60299 673 aaPredicted RBP13.16□□□□□ -0.3
DDX54-201ENST00000306014 FOXD2O60548 495 aaPredicted RBP13.16□□□□□ -0.3
DDX54-201ENST00000306014 SLC25A14O95258 325 aaPredicted RBP13.16□□□□□ -0.3
DDX54-201ENST00000306014 ZNF12P17014 697 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 DUSP4Q13115 394 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 PTPRCAPQ14761 206 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 PACRGLQ8N7B6 248 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 ARNTL2Q8WYA1 636 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 CRTAC1Q9NQ79 661 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 BTBD3Q9Y2F9 522 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 DYRK1BQ9Y463 629 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 NT5C1B-RDH14C9J2C7 533 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 IGSF6O95976 241 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 NDST2P52849 883 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 NCF4Q15080 339 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 INAQ16352 499 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 NPWQ8N729 165 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 ABHD8Q96I13 439 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 EMILIN2Q9BXX0 1053 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 TMEM245Q9H330 911 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 ZCWPW2A0A1B0GU75 182 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 PIRO00625 290 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 RAP2AP10114 183 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 GGT5P36269 586 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 DGKQP52824 942 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 DIO3P55073 304 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 TUBA4AP68366 448 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 DAG1Q14118 895 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 SIRPB2Q5JXA9 342 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 GPR156Q8NFN8 814 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 WDR83Q9BRX9 315 aaKnown RBP13.16□□□□□ -0.3
DDX54-201ENST00000306014 MFSD1Q9H3U5 465 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 HIPK3Q9H422 1215 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 TFB2MQ9H5Q4 396 aaKnown RBP13.16□□□□□ -0.3
DDX54-201ENST00000306014 INTS10Q9NVR2 710 aaKnown RBP13.16□□□□□ -0.3
DDX54-201ENST00000306014 PDP1Q9P0J1 537 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms