RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 UNC5BQ8IZJ1 945 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 UBE2J2Q8N2K1 259 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 EXOSC8Q96B26 276 aaKnown RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 CCDC120Q96HB5 630 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 FAM210AQ96ND0 272 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ZFP3Q96NJ6 502 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 NPAS2Q99743 824 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 RBM4BQ9BQ04 359 aaKnown RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 RBM4Q9BWF3 364 aaKnown RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 IL1RAPQ9NPH3 570 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 CTDNEP1O95476 244 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 PLGP00747 810 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 LHCGRP22888 699 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 EPHX2P34913 555 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 UBAP2Q5T6F2 1119 aaKnown RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 C1orf186Q6ZWK4 172 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 RANBP3LQ86VV4 465 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 TMEM192Q8IY95 271 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 OR4C6Q8NH72 309 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 TIFAQ96CG3 184 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 NSMCE3Q96MG7 304 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 NXF3Q9H4D5 531 aaKnown RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 OSER1Q9NX31 292 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 A0A0J9YYE9 177 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 E2F3O00716 465 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 DHX15O43143 795 aaKnown RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 IFNA21P01568 189 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ITGA2BP08514 1039 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 NR4A1P22736 598 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 DCDC1P59894 354 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 C2orf80Q0P641 193 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 DNASE1L3Q13609 305 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 DLG2Q15700 870 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 AHSA2Q719I0 299 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 TNS4Q8IZW8 715 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 SLC39A3Q9BRY0 314 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 LGR4Q9BXB1 951 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 METTL8Q9H825 291 aaKnown RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 GDF3Q9NR23 364 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 IFT80Q9P2H3 777 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 IFT52Q9Y366 437 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 GRXCR2A6NFK2 248 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 WASHC1A8K0Z3 465 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 WASH3PC4AMC7 463 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 MPZL2O60487 215 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 SNX3O60493 162 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ADH1CP00326 375 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ADH1AP07327 375 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 PVALBP20472 110 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 KIR3DL1P43629 444 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 DUPD1Q68J44 220 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 GLYATQ6IB77 296 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 WASH2PQ6VEQ5 465 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 SPATA19Q7Z5L4 167 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 SYVN1Q86TM6 617 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ALLCQ8N6M5 410 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 OR10H4Q8NGA5 316 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 OR52J3Q8NH60 311 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 OVCA2Q8WZ82 227 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 B3GNT4Q9C0J1 378 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 CDH19Q9H159 772 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 TREM1Q9NP99 234 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ENY2Q9NPA8 101 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 SNTG1Q9NSN8 517 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 COPS7AQ9UBW8 275 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 NOX1Q9Y5S8 564 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 TRBV23OR9-2A0A075B6M9 112 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 VSTM5A8MXK1 200 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 SEPT4O43236 478 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 HOXC6P09630 235 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 IDSP22304 550 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ALDH4A1P30038 563 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 CDH13P55290 713 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 CDK18Q07002 472 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 GRHL2Q6ISB3 625 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 GRPEL2Q8TAA5 225 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 HDAC10Q969S8 669 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ABCG2Q9UNQ0 655 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 NPEPPSL1A6NEC2 478 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 PRMT5O14744 637 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-201ENST00000302528 GSC2O15499 205 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ASGR1P07306 291 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ASMTP46597 345 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 FSTL1Q12841 308 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 SMARCD3Q6STE5 483 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 UNC93AQ86WB7 457 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF398Q8TD17 642 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 SOCS4Q8WXH5 440 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 RIT1Q92963 219 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 NXNL1Q96CM4 212 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 KCNIP3Q9Y2W7 256 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 NR2E1Q9Y466 385 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 PEX16Q9Y5Y5 336 aa10.31□□□□□ -0.76
CLIP1-201ENST00000302528 E7ENX8 843 aa10.3□□□□□ -0.76
CLIP1-201ENST00000302528 H3BM21 787 aa10.3□□□□□ -0.76
CLIP1-201ENST00000302528 CSN2P05814 226 aa10.3□□□□□ -0.76
CLIP1-201ENST00000302528 CCKBRP32239 447 aa10.3□□□□□ -0.76
CLIP1-201ENST00000302528 PTPN9P43378 593 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms