RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 VITQ6UXI7 678 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 SUGP1Q8IWZ8 645 aaKnown RBP11.88□□□□□ -0.51
TPM3-202ENST00000302206 C10orf67Q8IYJ2 551 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 PHTF2Q8N3S3 785 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 SIDT2Q8NBJ9 832 aaKnown RBP11.88□□□□□ -0.51
TPM3-202ENST00000302206 TMIEQ8NEW7 156 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 GIMAP7Q8NHV1 300 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 SORCS1Q8WY21 1168 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 ELSPBP1Q96BH3 223 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 SLC7A6OSQ96CW6 309 aaPredicted RBP11.88□□□□□ -0.51
TPM3-202ENST00000302206 RAB3IPQ96QF0 476 aaPredicted RBP11.88□□□□□ -0.51
TPM3-202ENST00000302206 CCDC106Q9BWC9 280 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 C1QTNF3Q9BXJ4 246 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 UNKQ9C0B0 810 aaKnown RBP11.88□□□□□ -0.51
TPM3-202ENST00000302206 ZMYND15Q9H091 742 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 EBF3Q9H4W6 596 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 GSTO2Q9H4Y5 243 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 SLC40A1Q9NP59 571 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 ARL8BQ9NVJ2 186 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 ZDHHC2Q9UIJ5 367 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 RNF112Q9ULX5 631 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 TRIM33Q9UPN9 1127 aa11.88□□□□□ -0.51
TPM3-202ENST00000302206 TRIOO75962 3097 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 PRRT4C9JH25 899 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 PSMD11O00231 422 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 SLC22A2O15244 555 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 DIAPH2O60879 1101 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 RASSF9O75901 435 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 CTSLP07711 333 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 CBSLP0DN79 551 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 PRDX6P30041 224 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 ADSLP30566 484 aaPredicted RBP11.87□□□□□ -0.51
TPM3-202ENST00000302206 CBSP35520 551 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 SLC6A11P48066 632 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 RGS4P49798 205 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 RUNX3Q13761 415 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 HNRNPA1L2Q32P51 320 aaKnown RBP11.87□□□□□ -0.51
TPM3-202ENST00000302206 UNC50Q53HI1 259 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 ACAD11Q709F0 780 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 TTC7BQ86TV6 843 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 NRSN1Q8IZ57 195 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 PTGR2Q8N8N7 351 aaPredicted RBP11.87□□□□□ -0.51
TPM3-202ENST00000302206 UCMAQ8WVF2 138 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 OR8D1Q8WZ84 308 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 FUBP1Q96AE4 644 aaKnown RBP11.87□□□□□ -0.51
TPM3-202ENST00000302206 LINGO1Q96FE5 620 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 SLC30A3Q99726 388 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 RASSF4Q9H2L5 321 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 CYP4F12Q9HCS2 524 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 PCDH12Q9NPG4 1184 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 MRGBPQ9NV56 204 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 GALPQ9UBC7 116 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 FNDC3AQ9Y2H6 1198 aaKnown RBP11.87□□□□□ -0.51
TPM3-202ENST00000302206 MTF2Q9Y483 593 aaPredicted RBP11.87□□□□□ -0.51
TPM3-202ENST00000302206 COL4A3Q01955 1670 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 C5orf42Q9H799 3197 aa11.87□□□□□ -0.51
TPM3-202ENST00000302206 MYO7AQ13402 2215 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 C16orf96A6NNT2 1141 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 H3BQ06 376 aaPredicted RBP11.86□□□□□ -0.51
TPM3-202ENST00000302206 UBXN8O00124 270 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 LINC01565O15544 149 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 MAGEC1O60732 1142 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 ECI2O75521 394 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 CBX6O95503 412 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 FGF4P08620 206 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 ESRRAP11474 423 aaPredicted RBP11.86□□□□□ -0.51
TPM3-202ENST00000302206 UGT1A6P19224 532 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 UGT1A1P22309 533 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 UGT1A4P22310 534 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 XPAP23025 273 aaPredicted RBP11.86□□□□□ -0.51
TPM3-202ENST00000302206 DGKAP23743 735 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 ITGB7P26010 798 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 UGT1A3P35503 534 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 UGT1A5P35504 534 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 CCR10P46092 362 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 ALDH18A1P54886 795 aaKnown RBP11.86□□□□□ -0.51
TPM3-202ENST00000302206 INHBCP55103 352 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 RALGDSQ12967 914 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 TSNQ15631 228 aaKnown RBP11.86□□□□□ -0.51
TPM3-202ENST00000302206 TTLL9Q3SXZ7 439 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 SLC9B1Q4ZJI4 515 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 FNDC3BQ53EP0 1204 aaKnown RBP11.86□□□□□ -0.51
TPM3-202ENST00000302206 SH2D4BQ5SQS7 431 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 GPRC6AQ5T6X5 926 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 CES5AQ6NT32 575 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 ERAP2Q6P179 960 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 ADAMTSL2Q86TH1 951 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 GPSM1Q86YR5 675 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 YAF2Q8IY57 180 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 CPNE9Q8IYJ1 553 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 FBXO39Q8N4B4 442 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 TRAM1L1Q8N609 369 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 ZBTB2Q8N680 514 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 TERB1Q8NA31 727 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 MAPK15Q8TD08 544 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 EEF1AKMT1Q8WVE0 214 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 NXPE3Q969Y0 559 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 PHF21BQ96EK2 531 aa11.86□□□□□ -0.51
TPM3-202ENST00000302206 PRR11Q96HE9 360 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms