RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 LGALS13Q9UHV8 139 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 CCL26Q9Y258 94 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 DTNAQ9Y4J8 743 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 ESR1P03372 595 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 ARSAP15289 507 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 GGT5P36269 586 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 ETV3P41162 512 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 LYPLAL1Q5VWZ2 237 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 GALNT13Q8IUC8 556 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 BEND7Q8N7W2 519 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-201ENST00000299267 FGF13Q92913 245 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 TMEM109Q9BVC6 243 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 ADNPQ9H2P0 1102 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 RMND5AQ9H871 391 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 USP3Q9Y6I4 520 aa10.09□□□□□ -0.79
GABRB3-201ENST00000299267 A0A0G2JN53 185 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 FAM159BA6NKW6 160 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 BIRC5O15392 142 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 STATHP02808 62 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ZNF23P17027 643 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 CD68P34810 354 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 MAGEA10P43363 369 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 CCR10P46092 362 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 TRAF2Q12933 501 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 PTPRRQ15256 657 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 TMEM198Q66K66 360 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 BCL7CQ8WUZ0 217 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 EEF1AKMT1Q8WVE0 214 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ATL1Q8WXF7 558 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 IMP4Q96G21 291 aaKnown RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 BBS4Q96RK4 519 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 EBF4Q9BQW3 602 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 SFXN1Q9H9B4 322 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 MARCH4Q9P2E8 410 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 A0A1W2PP55 124 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 TMEM233B4DJY2 109 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 KAT7O95251 611 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 HNF1BP35680 557 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 CLCQ05315 142 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 FRG1Q14331 258 aaKnown RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 XKR4Q5GH76 650 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 OTUD3Q5T2D3 398 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ENPP7Q6UWV6 458 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 TPRG1Q6ZUI0 275 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 GAREM2Q75VX8 874 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 SNX20Q7Z614 316 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 TSPAN33Q86UF1 283 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 PYDC1Q8WXC3 89 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 OVCA2Q8WZ82 227 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 CDH19Q9H159 772 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 AHSPQ9NZD4 102 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 TBX21Q9UL17 535 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 SNX6Q9UNH7 406 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ASXL3Q9C0F0 2248 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 UTRNP46939 3433 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 GPR39O43194 453 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ITM2AO43736 263 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 KLKB1P03952 638 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ASLP04424 464 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 GSNP06396 782 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 DDX6P26196 483 aaKnown RBP eCLIP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ECHS1P30084 290 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ATP6V1E1P36543 226 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ACTR1BP42025 376 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 SOX9P48436 509 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ACTR1AP61163 376 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 MPP2Q14168 576 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 SLC30A9Q6PML9 568 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ANKRD33Q7Z3H0 272 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 TDRPQ86YL5 185 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 TMEM174Q8WUU8 243 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 SKA1Q96BD8 255 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 MTERF1Q99551 399 aaKnown RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 NPAS2Q99743 824 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 TBC1D10AQ9BXI6 508 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 CARS2Q9HA77 564 aaKnown RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 PAK6Q9NQU5 681 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-201ENST00000299267 ARL8BQ9NVJ2 186 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 GALPQ9UBC7 116 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 KCNK6Q9Y257 313 aa10.08□□□□□ -0.8
GABRB3-201ENST00000299267 LINC01553A4QN01 128 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 RB1P06400 928 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CAPN1P07384 714 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 ATP6V1B2P21281 511 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 IDSP22304 550 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 GSSP48637 474 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 PXNP49023 591 aaPredicted RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 TMEM240Q5SV17 173 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 FITM2Q8N6M3 262 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 WFIKKN2Q8TEU8 576 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CLP1Q92989 425 aaKnown RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 TCF12Q99081 682 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 ZNF490Q9ULM2 529 aaPredicted RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 SPACA6W5XKT8 324 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 LRRC72A6NJI9 287 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 C16orf96A6NNT2 1141 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 ENTPD5O75356 428 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 GABBR2O75899 941 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 HNRNPH1P31943 449 aaKnown RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 PREPP48147 710 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms