RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 HTR6P50406 440 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 POLR2JP52435 117 aaKnown RBP13.49□□□□□ -0.25
BCCIP-202ENST00000299130 OXCT1P55809 520 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 ERVPABLB-1P60509 514 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 C5orf22Q49AR2 442 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 TMEM259Q4ZIN3 620 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 ZRANB3Q5FWF4 1079 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 SLC2A7Q6PXP3 512 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 PRSS55Q6UWB4 352 aaPredicted RBP13.49□□□□□ -0.25
BCCIP-202ENST00000299130 LINGO4Q6UY18 593 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 C16orf59Q7L2K0 433 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 SPATA19Q7Z5L4 167 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 TRPV3Q8NET8 790 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 EZH1Q92800 747 aaPredicted RBP13.49□□□□□ -0.25
BCCIP-202ENST00000299130 CENPNQ96H22 339 aaPredicted RBP13.49□□□□□ -0.25
BCCIP-202ENST00000299130 KCTD14Q9BQ13 255 aaPredicted RBP13.49□□□□□ -0.25
BCCIP-202ENST00000299130 TRIM15Q9C019 465 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 SCUBE2Q9NQ36 999 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 GKN1Q9NS71 199 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 SLC8A2Q9UPR5 921 aa13.49□□□□□ -0.25
BCCIP-202ENST00000299130 KLHL33A6NCF5 533 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 CCDC154A6NI56 674 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 OR6C75A6NL08 312 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 CBX4O00257 560 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 STX16O14662 325 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 ADAM12O43184 909 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 KDELR3O43731 214 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 TSPAN3O60637 253 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SNX2O60749 519 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 VPS4BO75351 444 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 EEDO75530 441 aaKnown RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 TMCC1O94876 653 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 UROSP10746 265 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 HRH2P25021 359 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SH3BGRP55822 239 aaPredicted RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 GPR17Q13304 367 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SLC36A3Q495N2 470 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 C6orf136Q5SQH8 315 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 NANOGP8Q6NSW7 305 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 TTC33Q6PID6 262 aaPredicted RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 TBPL2Q6SJ96 375 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 Q6ZSR9 355 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 LPCAT2Q7L5N7 544 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SPRED1Q7Z699 444 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 OFCC1Q8IZS5 231 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 TMEM199Q8N511 208 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 NKAPQ8N5F7 415 aaKnown RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 TTC16Q8NEE8 873 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 B4GALNT2Q8NHY0 566 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 PROKR1Q8TCW9 393 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 CYGBQ8WWM9 190 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 C1QTNF3Q9BXJ4 246 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 TRIM54Q9BYV2 358 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 RPF2Q9H7B2 306 aaKnown RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 NANOGQ9H9S0 305 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 CD274Q9NZQ7 290 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 AGO1Q9UL18 857 aaKnown RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 RAI2Q9Y5P3 530 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 C2orf81A6NN90 581 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SYCE1LA8MT33 242 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SCAMP3O14828 347 aaKnown RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 PRAMEF12O95522 483 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 LPOP22079 712 aaPredicted RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 MYF6P23409 242 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SLC11A1P49279 550 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 CDK9P50750 372 aaKnown RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 OR4D2P58180 307 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 FOXM1Q08050 763 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 TRAF2Q12933 501 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SELPLGQ14242 412 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 COQ5Q5HYK3 327 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 RGMBQ6NW40 437 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 LETMD1Q6P1Q0 360 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 RALGPS2Q86X27 583 aaPredicted RBP13.48□□□□□ -0.25
BCCIP-202ENST00000299130 GPSM1Q86YR5 675 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SFRP1Q8N474 314 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 PACRGLQ8N7B6 248 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 HM13Q8TCT9 377 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SPATA17Q96L03 361 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 SEPHS2Q99611 448 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 BRINP2Q9C0B6 783 aa13.48□□□□□ -0.25
BCCIP-202ENST00000299130 TMEM88BA6NKF7 163 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 SYNCRIPO60506 623 aaKnown RBP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 VPS26AO75436 327 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 RASAL1O95294 804 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 BMP10O95393 424 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 CD160O95971 181 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 CA5AP35218 305 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 RFC2P35250 354 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 ACLYP53396 1101 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 CDH4P55283 916 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 FCGRTP55899 365 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 PLIN5Q00G26 463 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 GPRIN3Q6ZVF9 776 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 PTRH1Q86Y79 214 aaKnown RBP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 BBS5Q8N3I7 341 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 FNDC5Q8NAU1 212 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 OR56A4Q8NGH8 313 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 BIRC7Q96CA5 298 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms