RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 LPOP22079 712 aaPredicted RBP11.99□□□□□ -0.49
PCF11-201ENST00000298281 PRKCIP41743 596 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ENPEPQ07075 957 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 C10orf107Q8IVU9 208 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 SPAG16Q8N0X2 631 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 BHLHE22Q8NFJ8 381 aaPredicted RBP11.99□□□□□ -0.49
PCF11-201ENST00000298281 POC1BQ8TC44 478 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 FAM105AQ9NUU6 356 aa11.99□□□□□ -0.49
PCF11-201ENST00000298281 ANKRD34BA5PLL1 514 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 IDO1P14902 403 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 ZNF20P17024 532 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 CCR3P51677 355 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 NAGLUP54802 743 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 ARFRP1Q13795 201 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 RUNX2Q13950 521 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 FAM92BQ6ZTR7 304 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 GPRIN3Q6ZVF9 776 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 GALNT11Q8NCW6 608 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 CIDECQ96AQ7 238 aaPredicted RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 GAD1Q99259 594 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 MCMBPQ9BTE3 642 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 TLR10Q9BXR5 811 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 SPATA7Q9P0W8 599 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 WASF3Q9UPY6 502 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 DDTLA6NHG4 134 aaPredicted RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 ARPC2O15144 300 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 OAZ2O95190 189 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 SLC16A8O95907 504 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 NR2F6P10588 404 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 RPS2P15880 293 aaKnown RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 CCKBRP32239 447 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 ZNF554Q86TJ5 538 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 MARK4Q96L34 752 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 ABCB9Q9NP78 766 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 ALG5Q9Y673 324 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 TEX13CA0A0J9YWL9 993 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 C9IYK1 514 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 IRF2P14316 349 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 GADD45AP24522 165 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 CD86P42081 329 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 GJA9P57773 515 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 DEFA5Q01523 94 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 NTRK3Q16288 839 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 INTS6LQ5JSJ4 861 aaKnown RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 CES3Q6UWW8 571 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 CHSY3Q70JA7 882 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 CIR1Q86X95 450 aaPredicted RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 RASGEF1CQ8N431 466 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 HELQQ8TDG4 1101 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 RPL26L1Q9UNX3 145 aaKnown RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 TM7SF2O76062 418 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 KAT7O95251 611 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 RAB10P61026 200 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 ANO7Q6IWH7 933 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 TAPT1Q6NXT6 567 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 GPR180Q86V85 440 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 ASB12Q8WXK4 309 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 HTATIP2Q9BUP3 242 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 PCYOX1Q9UHG3 505 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 CSDE1O75534 798 aaKnown RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 FGF1P05230 155 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 MRPS22P82650 360 aaKnown RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 EEF1A2Q05639 463 aaKnown RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 AMZ1Q400G9 498 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 POTEHQ6S545 545 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 RBFAQ8N0V3 343 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 OR8H3Q8N146 312 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 HPS1Q92902 700 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 GFM1Q96RP9 751 aaKnown RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 C2CD2Q9Y426 696 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 KCNJ13O60928 360 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 PGRP06401 933 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 PVALBP20472 110 aaPredicted RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 PSMB4P28070 264 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 CBLBQ13191 982 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 CRTC3Q6UUV7 619 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 SLC30A10Q6XR72 485 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 GPC2Q8N158 579 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 OR8D1Q8WZ84 308 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 TCF25Q9BQ70 676 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 ZNF717Q9BY31 904 aaPredicted RBP11.98□□□□□ -0.49
PCF11-201ENST00000298281 MTMR10Q9NXD2 777 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 PTCH2Q9Y6C5 1203 aa11.98□□□□□ -0.49
PCF11-201ENST00000298281 SLC25A14O95258 325 aaPredicted RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 TNFRSF8P28908 595 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 HNF1BP35680 557 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 TAS2R50P59544 299 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 DENND1CQ8IV53 801 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 PRSS58Q8IYP2 241 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 PTGR2Q8N8N7 351 aaPredicted RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 OR5T2Q8NGG2 359 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 DPEP2Q9H4A9 486 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 TRPS1Q9UHF7 1281 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 RAP2CQ9Y3L5 183 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 ERCC1P07992 297 aaPredicted RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 ELFN1P0C7U0 828 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 SHMT1P34896 483 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 CASP5P51878 434 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 CDH4P55283 916 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 ZNF627Q7L945 461 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms