RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 ABHD18Q0P651 414 aa19.32■□□□□ 0.68
CXCL3-201ENST00000296026 KCNAB2Q13303 367 aa19.32■□□□□ 0.68
CXCL3-201ENST00000296026 SEPT7Q16181 437 aaKnown RBP19.32■□□□□ 0.68
CXCL3-201ENST00000296026 TEX44Q53QW1 395 aa19.32■□□□□ 0.68
CXCL3-201ENST00000296026 C9orf72Q96LT7 481 aa19.32■□□□□ 0.68
CXCL3-201ENST00000296026 CCDC42Q96M95 316 aa19.32■□□□□ 0.68
CXCL3-201ENST00000296026 EFHD1Q9BUP0 239 aa19.32■□□□□ 0.68
CXCL3-201ENST00000296026 TRIT1Q9H3H1 467 aaKnown RBP19.32■□□□□ 0.68
CXCL3-201ENST00000296026 ABHD10Q9NUJ1 306 aa19.32■□□□□ 0.68
CXCL3-201ENST00000296026 SIDT1Q9NXL6 827 aaKnown RBP19.32■□□□□ 0.68
CXCL3-201ENST00000296026 SPO11Q9Y5K1 396 aa19.32■□□□□ 0.68
CXCL3-201ENST00000296026 SLC30A1Q9Y6M5 507 aa19.32■□□□□ 0.68
CXCL3-201ENST00000296026 A0A0A6YYK5 440 aaPredicted RBP19.31■□□□□ 0.68
CXCL3-201ENST00000296026 CBFA2T2O43439 604 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 VEGFDO43915 354 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 UBXN7O94888 489 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 CDK14O94921 469 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 PRKAR1AP10644 381 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 AMD1P17707 334 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 NOP2P46087 812 aaKnown RBP19.31■□□□□ 0.68
CXCL3-201ENST00000296026 FOXM1Q08050 763 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 KHDC1Q4VXA5 237 aaKnown RBP19.31■□□□□ 0.68
CXCL3-201ENST00000296026 MFSD7Q6UXD7 560 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 ZNF547Q8IVP9 402 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 RHOT1Q8IXI2 618 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 TEKT5Q96M29 485 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 SRPK1Q96SB4 655 aaKnown RBP19.31■□□□□ 0.68
CXCL3-201ENST00000296026 TIMM29Q9BSF4 260 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 NHEJ1Q9H9Q4 299 aaPredicted RBP19.31■□□□□ 0.68
CXCL3-201ENST00000296026 BPIFA1Q9NP55 256 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 DDX56Q9NY93 547 aaKnown RBP19.31■□□□□ 0.68
CXCL3-201ENST00000296026 UBP1Q9NZI7 540 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 TMPRSS11EQ9UL52 423 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 HYOU1Q9Y4L1 999 aa19.31■□□□□ 0.68
CXCL3-201ENST00000296026 BOD1L1Q8NFC6 3051 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 PRR19A6NJB7 356 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 DLGAP3O95886 979 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 PTPN3P26045 913 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 RPL10P27635 214 aaKnown RBP19.3■□□□□ 0.68
CXCL3-201ENST00000296026 SLC1A1P43005 524 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 CDC20Q12834 499 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 PRKD1Q15139 912 aaPredicted RBP19.3■□□□□ 0.68
CXCL3-201ENST00000296026 ABRAXAS1Q6UWZ7 409 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 PTRH1Q86Y79 214 aaKnown RBP19.3■□□□□ 0.68
CXCL3-201ENST00000296026 TGM7Q96PF1 710 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 VPS35Q96QK1 796 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 POT1Q9NUX5 634 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 SAE1Q9UBE0 346 aaPredicted RBP19.3■□□□□ 0.68
CXCL3-201ENST00000296026 TUBD1Q9UJT1 453 aa19.3■□□□□ 0.68
CXCL3-201ENST00000296026 TPM1P09493 284 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 BRAFP15056 766 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 IDSP22304 550 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 SEPHS1P49903 392 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 DRG2P55039 364 aaKnown RBP19.29■□□□□ 0.68
CXCL3-201ENST00000296026 ATP13A5Q4VNC0 1218 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 BZW1Q7L1Q6 419 aaKnown RBP19.29■□□□□ 0.68
CXCL3-201ENST00000296026 ESX1Q8N693 406 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 GDAP1Q8TB36 358 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 STARD8Q92502 1023 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 RNF31Q96EP0 1072 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 ULBP3Q9BZM4 244 aa19.29■□□□□ 0.68
CXCL3-201ENST00000296026 ZNF106Q9H2Y7 1883 aaKnown RBP19.28■□□□□ 0.68
CXCL3-201ENST00000296026 OR52A4PA6NMU1 304 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 TOX3O15405 576 aaPredicted RBP19.28■□□□□ 0.68
CXCL3-201ENST00000296026 ARHGAP6O43182 974 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 SPOPO43791 374 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 MFAP3LO75121 409 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 PECAM1P16284 738 aaPredicted RBP19.28■□□□□ 0.68
CXCL3-201ENST00000296026 COMTP21964 271 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 OAS2P29728 719 aaKnown RBP19.28■□□□□ 0.68
CXCL3-201ENST00000296026 CD68P34810 354 aaPredicted RBP19.28■□□□□ 0.68
CXCL3-201ENST00000296026 HMGCLP35914 325 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 STAT5AP42229 794 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 CDKN2BP42772 138 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 LEPRP48357 1165 aaKnown RBP19.28■□□□□ 0.68
CXCL3-201ENST00000296026 NR2C2P49116 596 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 TLE1Q04724 770 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 TMEM115Q12893 351 aaPredicted RBP19.28■□□□□ 0.68
CXCL3-201ENST00000296026 GTF2H3Q13889 308 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 TFDP2Q14188 446 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 MAP7Q14244 749 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 NOMO1Q15155 1222 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 LLGL1Q15334 1064 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 AGAP9Q5VTM2 703 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 WASH2PQ6VEQ5 465 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 C11orf96Q7Z7L8 435 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 TRAPPC5Q8IUR0 188 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 VSTM4Q8IW00 320 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 TFB1MQ8WVM0 346 aaKnown RBP19.28■□□□□ 0.68
CXCL3-201ENST00000296026 RSC1A1Q92681 617 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 CXorf40BQ96DE9 158 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 ANP32EQ9BTT0 268 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 ZNF768Q9H5H4 540 aaKnown RBP19.28■□□□□ 0.68
CXCL3-201ENST00000296026 SLC40A1Q9NP59 571 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 WASH6PQ9NQA3 447 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 TRIM10Q9UDY6 481 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 FAM153AQ9UHL3 310 aa19.28■□□□□ 0.68
CXCL3-201ENST00000296026 TLN1Q9Y490 2541 aaKnown RBP19.27■□□□□ 0.68
CXCL3-201ENST00000296026 LOC285095A0A1B0GVY8 99 aa19.27■□□□□ 0.68
CXCL3-201ENST00000296026 CST8O60676 142 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms