RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 OR2T12Q8NG77 320 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 C19orf60Q96EN9 201 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 OR2AG1Q9H205 316 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 WDR26Q9H7D7 661 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 EIF2B3Q9NR50 452 aaKnown RBP18.37■□□□□ 0.53
PCDH1-201ENST00000287008 COQ6Q9Y2Z9 468 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 ADAMTS3O15072 1205 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 OR1F1O43749 312 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 C8GP07360 202 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 TFPIP10646 304 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 GNAZP19086 355 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 ST13P50502 369 aaKnown RBP18.37■□□□□ 0.53
PCDH1-201ENST00000287008 SULT1C3Q6IMI6 304 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 GDPD4Q6W3E5 623 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 IQCKQ8N0W5 287 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 SLC43A3Q8NBI5 491 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 ZNF563Q8TA94 476 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 TRIB2Q92519 343 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 TEFMQ96QE5 360 aaKnown RBP18.37■□□□□ 0.53
PCDH1-201ENST00000287008 RAD9AQ99638 391 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 ZNF180Q9UJW8 692 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 IFT172Q9UG01 1749 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 PRMT3O60678 531 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 FGFR3P22607 806 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 CHRNA4P43681 627 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 MASP1P48740 699 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 MAPK12P53778 367 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 UBAP2LQ14157 1087 aaKnown RBP18.37■□□□□ 0.53
PCDH1-201ENST00000287008 NRF1Q16656 503 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 CMTM8Q8IZV2 173 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 OR8H2Q8N162 312 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 OR2AP1Q8NGE2 309 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 LMO7Q8WWI1 1683 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 A0A087WXM4 84 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 A0A0J9YYE9 177 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 MCIDASD6RGH6 385 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 GSTM5P46439 218 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 KCNQ1P51787 676 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 GHRHRQ02643 423 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 CLCQ05315 142 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 PPM1JQ5JR12 505 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 DEF8Q6ZN54 512 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 NIPA2Q8N8Q9 360 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 TTC29Q8NA56 475 aaPredicted RBP18.37■□□□□ 0.53
PCDH1-201ENST00000287008 Q96MT0 163 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 SALL4Q9UJQ4 1053 aa18.37■□□□□ 0.53
PCDH1-201ENST00000287008 CENPXA8MT69 81 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 BCL10O95999 233 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 PRG2P13727 222 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 CEP78Q5JTW2 689 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 TBC1D10AQ9BXI6 508 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 SCML2Q9UQR0 700 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 PCDHGA11Q9Y5H2 935 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 SLC35G1Q2M3R5 365 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 TTC27Q6P3X3 843 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 DEPDC4Q8N2C3 294 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 SPOCK2Q92563 424 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 GSTK1Q9Y2Q3 226 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 GMPPBQ9Y5P6 360 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 HEBP2Q9Y5Z4 205 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 WNT6Q9Y6F9 365 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 PRRC2BQ5JSZ5 2229 aaKnown RBP18.36■□□□□ 0.53
PCDH1-201ENST00000287008 INPPL1O15357 1258 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 TGDSO95455 350 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 PSMG1O95456 288 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 VARSP26640 1264 aaKnown RBP18.36■□□□□ 0.53
PCDH1-201ENST00000287008 TAS2R39P59534 338 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 NRG1Q02297 640 aaPredicted RBP18.36■□□□□ 0.53
PCDH1-201ENST00000287008 FSTL4Q6MZW2 842 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 FAM220AQ7Z4H9 259 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 AHI1Q8N157 1196 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 PRDM8Q9NQV8 689 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 FNIP2Q9P278 1114 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 MTRRQ9UBK8 725 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 TLL2Q9Y6L7 1015 aa18.36■□□□□ 0.53
PCDH1-201ENST00000287008 MTMR11A4FU01 709 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 BBIP1A8MTZ0 92 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 LAMP2P13473 410 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 STXBP1P61764 594 aaKnown RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 SEMG2Q02383 582 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 FASTKD3Q14CZ7 662 aaKnown RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 ARSIQ5FYB1 569 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 BRAT1Q6PJG6 821 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 CPSF7Q8N684 471 aaKnown RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 CMASQ8NFW8 434 aaPredicted RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 ZNF671Q8TAW3 534 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 CARS2Q9HA77 564 aaKnown RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 DHRS12A0PJE2 317 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 GABRDO14764 452 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 MED26O95402 600 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 CST1P01037 141 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 SPIBQ01892 262 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 SNX20Q7Z614 316 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 PEX5LQ8IYB4 626 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 SLC9A6Q92581 669 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 EXOSC8Q96B26 276 aaKnown RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 CNPPD1Q9BV87 410 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 INTS10Q9NVR2 710 aaKnown RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 POLR3BQ9NW08 1133 aaPredicted RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 SEC14L3Q9UDX4 400 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms