RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PRSS21Q9Y6M0 314 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 PLXNB3Q9ULL4 1909 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 AXIN1O15169 862 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 MTX2O75431 263 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 MPOP05164 745 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 ATP1B2P14415 290 aaPredicted RBP18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 MSH3P20585 1137 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 CD9P21926 228 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 CRABP2P29373 138 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 HOXA6P31267 233 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 WDR4P57081 412 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 GNGT1P63211 74 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 TIAL1Q01085 375 aaKnown RBP eCLIP18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 KHDC1Q4VXA5 237 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 KIAA0895LQ68EN5 471 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 PTRHD1Q6GMV3 140 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 MACC1Q6ZN28 852 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 DENND6BQ8NEG7 585 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 TCP10LQ8TDR4 215 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 KCNJ9Q92806 393 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 CABS1Q96KC9 395 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 PCMTD2Q9NV79 361 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 NKIRAS1Q9NYS0 192 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 MUC3AQ02505 3323 aa18.69■□□□□ 0.58
PDLIM3-202ENST00000284770 A0A096LPK6 155 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 H3BMM5 538 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 RHOBTB1O94844 696 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 ZWINTO95229 277 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 IGHV4-34P06331 123 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 C2P06681 752 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 GABPB1Q06547 395 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 TMEM115Q12893 351 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 PDE1CQ14123 709 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 PPM1JQ5JR12 505 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 CDHR3Q6ZTQ4 885 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 RAPH1Q70E73 1250 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 HEATR4Q86WZ0 1026 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 MGARPQ8TDB4 240 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 COX14Q96I36 57 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 TEX101Q9BY14 249 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 TRIM39Q9HCM9 518 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 FZD3Q9NPG1 666 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 TAS2R13Q9NYV9 303 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 TLK1Q9UKI8 766 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 COPEO14579 308 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 TM9SF1O15321 606 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 PHGDHO43175 533 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 AP2A2O94973 939 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 ASMTLO95671 621 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 SLC35E2BP0CK96 405 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 PGGT1BP53609 377 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 CDK3Q00526 305 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 TERF2Q15554 542 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 ZNF648Q5T619 568 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 NAT14Q8WUY8 206 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 WDR26Q9H7D7 661 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 POPDC3Q9HBV1 291 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 MLXIPLQ9NP71 852 aa18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 PRMT8Q9NR22 394 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-202ENST00000284770 CCDC163A0A0D9SF12 145 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 E5RI56 91 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 NDUFS2O75306 463 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 NIPSNAP2O75323 286 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 VPS26AO75436 327 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 FSBPO95073 299 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 OR56A5P0C7T3 313 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 CHRM3P20309 590 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 HNRNPA2B1P22626 353 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 LSP1P33241 339 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 CRHR1P34998 444 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 IGFALSP35858 605 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 SKIV2L2P42285 1042 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 ZNF460Q14592 562 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 USP39Q53GS9 565 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 TAF1BQ53T94 588 aaPredicted RBP18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 CCDC91Q7Z6B0 441 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 TRIM74Q86UV6 250 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 BIRC7Q96CA5 298 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 SGF29Q96ES7 293 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 SPACA7Q96KW9 195 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 SLC13A1Q9BZW2 595 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 ZCCHC2Q9C0B9 1178 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 VPS11Q9H270 941 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 C12orf65Q9H3J6 166 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 EBF2Q9HAK2 575 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 SLC17A7Q9P2U7 560 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 ACOT9Q9Y305 439 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 OAS3Q9Y6K5 1087 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 NCOR1O75376 2440 aa18.67■□□□□ 0.58
PDLIM3-202ENST00000284770 IQCF5A8MTL0 148 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 NUDT1P36639 197 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 ETV4P43268 484 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 CCT5P48643 541 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 DET1Q7L5Y6 550 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 ADGRG6Q86SQ4 1221 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 PIM3Q86V86 326 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 RASGEF1AQ8N9B8 481 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 FAM136AQ96C01 138 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 GPR21Q99679 349 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms