RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 DEAF1O75398 565 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 KATNA1O75449 491 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 JRKO75564 520 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 PABPC1P11940 636 aaKnown RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 PIK3CGP48736 1102 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 IL5RAQ01344 420 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 CHRNB3Q05901 458 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 CHDHQ8NE62 594 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 OR7A2PQ8NGA2 310 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 LPPQ93052 612 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 THUMPD3Q9BV44 507 aaKnown RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 TRIM54Q9BYV2 358 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 NOL6Q9H6R4 1146 aaKnown RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 HMG20AQ9NP66 347 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 CNGB3Q9NQW8 809 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 ABCB10Q9NRK6 738 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 MRGBPQ9NV56 204 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 FAM118AQ9NWS6 357 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 POLR2AP24928 1970 aaKnown RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 GSTA4O15217 222 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 TBC1D4O60343 1298 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 GOT2P00505 430 aaKnown RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 FTH1P02794 183 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 HAPLN1P10915 354 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 GJA8P48165 433 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 ATP4BP51164 291 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 NCS1P62166 190 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 SIM2Q14190 667 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 ZNF846Q147U1 533 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 NKG7Q16617 165 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 AASDHQ4L235 1098 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 INTS6LQ5JSJ4 861 aaKnown RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 KANK2Q63ZY3 851 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 ADCK1Q86TW2 530 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 PDPRQ8NCN5 879 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 RPL3LQ92901 407 aaKnown RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 MYOCQ99972 504 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 TUBA1CQ9BQE3 449 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 FEM1AQ9BSK4 669 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 FAM124BQ9H5Z6 455 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-202ENST00000273342 SLC52A3Q9NQ40 469 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 DERAQ9Y315 318 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 IPPQ9Y573 584 aa12.8□□□□□ -0.36
COL8A1-202ENST00000273342 PSMD11O00231 422 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 MITFO75030 526 aaPredicted RBP12.79□□□□□ -0.36
COL8A1-202ENST00000273342 OR4F21O95013 312 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 F9P00740 461 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 SLC2A3P11169 496 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 TCEA1P23193 301 aaKnown RBP12.79□□□□□ -0.36
COL8A1-202ENST00000273342 RPS12P25398 132 aaKnown RBP12.79□□□□□ -0.36
COL8A1-202ENST00000273342 PSMB9P28065 219 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 POLD2P49005 469 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 CLCNKBP51801 687 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 GP2P55259 537 aaKnown RBP12.79□□□□□ -0.36
COL8A1-202ENST00000273342 MAPRE1Q15691 268 aaKnown RBP12.79□□□□□ -0.36
COL8A1-202ENST00000273342 ATP6AP1LQ52LC2 224 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 PM20D1Q6GTS8 502 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 TXNDC11Q6PKC3 985 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 NANOGNBQ7Z5D8 188 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 SYVN1Q86TM6 617 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 STON2Q8WXE9 905 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 FKBP10Q96AY3 582 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 MYLKQ15746 1914 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 NPEPPSL1A6NEC2 478 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 BMP4P12644 408 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 PNPLA4P41247 253 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 GSSP48637 474 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 C18orf21Q32NC0 220 aaPredicted RBP12.79□□□□□ -0.36
COL8A1-202ENST00000273342 ADPRMQ3LIE5 342 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 SULT1C3Q6IMI6 304 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 TAPT1Q6NXT6 567 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 PAGE2Q7Z2X7 111 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 MILR1Q7Z6M3 343 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 CIR1Q86X95 450 aaPredicted RBP12.79□□□□□ -0.36
COL8A1-202ENST00000273342 FAM126BQ8IXS8 530 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 COLGALT2Q8IYK4 626 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 CLIP4Q8N3C7 705 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 TMEM199Q8N511 208 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 C3orf58Q8NDZ4 430 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 ZNF555Q8NEP9 628 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 OR10A6Q8NH74 314 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 NCLNQ969V3 563 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 NODALQ96S42 347 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 TMEM209Q96SK2 561 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 PRKD2Q9BZL6 878 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 GPN2Q9H9Y4 310 aaPredicted RBP12.79□□□□□ -0.36
COL8A1-202ENST00000273342 SPC25Q9HBM1 224 aa12.79□□□□□ -0.36
COL8A1-202ENST00000273342 LEF1Q9UJU2 399 aaPredicted RBP12.79□□□□□ -0.36
COL8A1-202ENST00000273342 ASB14A6NK59 587 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 BTN3A1O00481 513 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 NDUFS2O75306 463 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 GPR32O75388 356 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 RHOBTB1O94844 696 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 ZNF37AP17032 561 aaPredicted RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 WARSP23381 471 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 DNAJB2P25686 324 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 NR4A2P43354 598 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms