RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 GPRIN3Q6ZVF9 776 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 ZSCAN4Q8NAM6 433 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 ELAC1Q9H777 363 aaKnown RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 GJB4Q9NTQ9 266 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PLD2O14939 933 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 OR10H3O60404 316 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 OR5F1O95221 314 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PNPLA2Q96AD5 504 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 KCNK4Q9NYG8 393 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PLA2R1Q13018 1463 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 DNAJA2O60884 412 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 BDNFP23560 247 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 ADRA1DP25100 572 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 ARL3P36405 182 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 CBLBQ13191 982 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 TAF5Q15542 800 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 FAM98AQ8NCA5 519 aaKnown RBP13.17□□□□□ -0.3
PRDM16-201ENST00000270722 TTLQ8NG68 377 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 LIN37Q96GY3 246 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-201ENST00000270722 FERD3LQ96RJ6 166 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 RANBP3Q9H6Z4 567 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-201ENST00000270722 ABHD14A-ACY1A0A1B0GW23 586 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 NUAK1O60285 661 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 KAT7O95251 611 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PFKFB4Q16877 469 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 LRRC38Q5VT99 294 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 NRSN1Q8IZ57 195 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 MCFD2Q8NI22 146 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 DPF1Q92782 380 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PPCDCQ96CD2 204 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 FUT8Q9BYC5 575 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 AHSA1O95433 338 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PSMG1O95456 288 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 MATN4O95460 622 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 IL12BP29460 328 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SLC9B1Q4ZJI4 515 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 USP51Q70EK9 711 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SLCO6A1Q86UG4 719 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 ATG4AQ8WYN0 398 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PGLYRP2Q96PD5 576 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 B3GAT2Q9NPZ5 323 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 CFL2Q9Y281 166 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PRH1P02810 166 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 GLUD2P49448 558 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SF1Q15637 639 aaKnown RBP13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PNLDC1Q8NA58 520 aaKnown RBP13.17□□□□□ -0.3
PRDM16-201ENST00000270722 RNF31Q96EP0 1072 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 GHRLQ9UBU3 117 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 CACNA1FO60840 1977 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PRMT5O14744 637 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-201ENST00000270722 NTSR2O95665 410 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SP2Q02086 613 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 TROAPQ12815 778 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 RIPK1Q13546 671 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 ZNF267Q14586 743 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-201ENST00000270722 ALG10Q5BKT4 473 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 ARCQ7LC44 396 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SSX6Q7RTT6 188 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 OR5T1Q8NG75 326 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 ARHGAP9Q9BRR9 750 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 FRMPD1Q5SYB0 1578 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SPAM1P38567 509 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 MAPK14Q16539 360 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SLC30A8Q8IWU4 369 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 OR2L5Q8NG80 312 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 RAD51AP1Q96B01 352 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SCGB3A2Q96PL1 93 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 WDR24Q96S15 920 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 GAD1Q99259 594 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SLC38A3Q99624 504 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 VPS25Q9BRG1 176 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 SPAG4Q9NPE6 437 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 MORF4L1Q9UBU8 362 aa13.17□□□□□ -0.3
PRDM16-201ENST00000270722 PVALBP20472 110 aaPredicted RBP13.16□□□□□ -0.3
PRDM16-201ENST00000270722 ALKBH2Q6NS38 261 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 KCNT2Q6UVM3 1135 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 SH2D3CQ8N5H7 860 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 ANKFN1Q8N957 763 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 SLAIN1Q8ND83 568 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 SERINC1Q9NRX5 453 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 PCDHB3Q9Y5E6 796 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 SPIN1Q9Y657 262 aaPredicted RBP13.16□□□□□ -0.3
PRDM16-201ENST00000270722 RP1P56715 2156 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 EIPR1Q53HC9 387 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 DNAJC14Q6Y2X3 702 aaPredicted RBP13.16□□□□□ -0.3
PRDM16-201ENST00000270722 ZC3H7AQ8IWR0 971 aaKnown RBP13.16□□□□□ -0.3
PRDM16-201ENST00000270722 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 LIX1Q8N485 282 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 LRRC52Q8N7C0 313 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 SMAD3P84022 425 aaKnown RBP13.16□□□□□ -0.3
PRDM16-201ENST00000270722 LRRC70Q7Z2Q7 622 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 MCOLN2Q8IZK6 566 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 NOL11Q9H8H0 719 aaKnown RBP13.16□□□□□ -0.3
PRDM16-201ENST00000270722 TMPRSS11EQ9UL52 423 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 PADI2Q9Y2J8 665 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 PEX16Q9Y5Y5 336 aa13.16□□□□□ -0.3
PRDM16-201ENST00000270722 DBTP11182 482 aaKnown RBP13.16□□□□□ -0.3
PRDM16-201ENST00000270722 CCNB1P14635 433 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms