RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TSPAN6O43657 245 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 NARSO43776 548 aaKnown RBP13.95□□□□□ -0.18
SS18-201ENST00000269137 ZBTB14O43829 449 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 DLX3O60479 287 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 TSPAN12O95859 305 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 SRFP11831 508 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 C6P13671 934 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 DNAJB13P59910 316 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 IL2P60568 153 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 DPTQ07507 201 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 ASPHQ12797 758 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 TDGQ13569 410 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 CRY1Q16526 586 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 PUS10Q3MIT2 529 aaKnown RBP13.95□□□□□ -0.18
SS18-201ENST00000269137 IER5LQ5T953 404 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 AGBL4Q5VU57 503 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 PTCRAQ6ISU1 281 aaPredicted RBP13.95□□□□□ -0.18
SS18-201ENST00000269137 KIAA1211LQ6NV74 962 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 ZCCHC23Q6ZST2 131 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 DDHD1Q8NEL9 900 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 BTN2A2Q8WVV5 523 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 KIAA1191Q96A73 305 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 PTERQ96BW5 349 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 CCDC126Q96EE4 140 aa13.95□□□□□ -0.18
SS18-201ENST00000269137 IQCF5A8MTL0 148 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 FADS2P1A8MWK0 482 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 TMEM114B3SHH9 223 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 CFAP99D6REC4 459 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 F8W8V4 182 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 EBAG9O00559 213 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 MMP20O60882 483 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 RECQL5O94762 991 aaPredicted RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 KLF8O95600 359 aaPredicted RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 HSF5Q4G112 596 aaPredicted RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 SLC44A4Q53GD3 710 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 ANKS4BQ8N8V4 417 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 TXNDC5Q8NBS9 432 aaKnown RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 CXorf40AQ8TE69 158 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 FAM131CQ96AQ9 280 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 ALG9Q9H6U8 611 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 CD248Q9HCU0 757 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 KCTD5Q9NXV2 234 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 KLHL14Q9P2G3 628 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 LOC730098B7Z3J9 87 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 LZTS3O60299 673 aaPredicted RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 AP2A2O94973 939 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 SLC25A14O95258 325 aaPredicted RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 TROVE2P10155 538 aaKnown RBP eCLIP13.94□□□□□ -0.18
SS18-201ENST00000269137 HOXB2P14652 356 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 KCNC1P48547 511 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 SLC1A6P48664 564 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 TAS2R38P59533 333 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 CCINQ13939 588 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 LDLRAP1Q5SW96 308 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 NAPRTQ6XQN6 538 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 SPATS2Q86XZ4 545 aaKnown RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 HDDC3Q8N4P3 179 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 STAG3L4Q8TBR4 150 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 GLYATL1Q969I3 302 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 ERLEC1Q96DZ1 483 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 NUS1Q96E22 293 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 DCUN1D1Q96GG9 259 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 PANX3Q96QZ0 392 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 PLCD4Q9BRC7 762 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 GATA5Q9BWX5 397 aaPredicted RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 C20orf27Q9GZN8 174 aa13.94□□□□□ -0.18
SS18-201ENST00000269137 MKRN2Q9H000 416 aaKnown RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 SPATS2LQ9NUQ6 558 aaKnown RBP13.94□□□□□ -0.18
SS18-201ENST00000269137 TRPM6Q9BX84 2022 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 MAGEC1O60732 1142 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 IPO13O94829 963 aaKnown RBP13.93□□□□□ -0.18
SS18-201ENST00000269137 TRIM16O95361 564 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 OR56A5P0C7T3 313 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 ATP1B2P14415 290 aaPredicted RBP13.93□□□□□ -0.18
SS18-201ENST00000269137 ABCE1P61221 599 aaKnown RBP13.93□□□□□ -0.18
SS18-201ENST00000269137 NFKB2Q00653 900 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 ZBTB16Q05516 673 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.93□□□□□ -0.18
SS18-201ENST00000269137 TMPRSS6Q8IU80 811 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 CRLF3Q8IUI8 442 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 SLC22A9Q8IVM8 553 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 CPNE9Q8IYJ1 553 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 LKAAEAR1Q8TD35 194 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 EEF1AKMT1Q8WVE0 214 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 FAM3CQ92520 227 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 LINGO1Q96FE5 620 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 ATOH8Q96SQ7 321 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 TRIM55Q9BYV6 548 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 SARS2Q9NP81 518 aaKnown RBP13.93□□□□□ -0.18
SS18-201ENST00000269137 SCML1Q9UN30 329 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 ARL2BPQ9Y2Y0 163 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 COQ6Q9Y2Z9 468 aa13.93□□□□□ -0.18
SS18-201ENST00000269137 A8MT66 165 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 MAN2B1O00754 1011 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 ITM2AO43736 263 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 KERAO60938 352 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 SOD1P00441 154 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 TPBGLP0DKB5 382 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 COL9A1P20849 921 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 AKT1P31749 480 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms